C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis associated 6-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106686 SPATA6L 9606 - 9:4553386-4666674 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000223517 SPATA6L-004 4625404-4666423 processed_transcript
  ENST00000381890 SPATA6L-012 4600520-4666347 protein_coding
  ENST00000406861 SPATA6L-010 4600611-4666449 nonsense_mediated_decay
  ENST00000451763 SPATA6L-011 4625638-4666399 retained_intron
  ENST00000461761 SPATA6L-002 4588821-4666423 nonsense_mediated_decay
  ENST00000471669 SPATA6L-006 4646299-4666307 retained_intron
  ENST00000475086 SPATA6L-009 4600610-4666666 protein_coding
  ENST00000485616 SPATA6L-001 4553386-4666508 nonsense_mediated_decay
  ENST00000485981 SPATA6L-015 4635275-4666436 processed_transcript
  ENST00000486047 SPATA6L-008 4588821-4666428 nonsense_mediated_decay
  ENST00000496798 SPATA6L-016 4625509-4666428 processed_transcript
  ENST00000497383 SPATA6L-014 4663098-4666464 processed_transcript
  ENST00000498087 SPATA6L-013 4625526-4666674 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLungMuscleOvaryTestisENST00000381890ENST00000406861ENST00000451763ENST00000475086ENST00000485616
Transcript ID Bladder Brain Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000381890 N/A N/A N/A N/A N/A 0.730±0.00 N/A N/A N/A
ENST00000406861 N/A 0.571±0.00 N/A N/A 0.967±0.00 0.599±0.00 N/A 1.024±0.00 2.390±0.44
ENST00000451763 0.462±0.00 0.248±0.00 N/A 0.032±0.00 N/A 0.171±0.00 0.126±0.00 N/A 0.898±0.00
ENST00000475086 N/A N/A 0.408±0.00 N/A N/A 0.914±0.00 N/A N/A 4.171±0.00
ENST00000485616 0.390±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NI CIL_0000NI_0001 CGP 9:3824127-4587469
CIL_0000NJ CIL_0000NJ_0001 CGP 9:4490444-4666674
CIL_0000NK CIL_0000NK_0001 CGP 9:4553386-4666674

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004874 spata6l spermatogenesis associated 6-like protein_coding Danio_rerio
ENSMUSG00000064202 4430402I18Rik RIKEN cDNA 4430402I18 gene protein_coding Mus_musculus

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