C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: oligonucleotide/oligosaccharide-binding fold containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000107960 OBFC1 9606 - 10:103882542-103918205 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000224950 OBFC1-001 103882542-103918205 protein_coding
  ENST00000369764 OBFC1-002 103882555-103917669 protein_coding
  ENST00000466828 OBFC1-004 103882555-103918130 processed_transcript
  ENST00000472951 OBFC1-003 103882745-103900153 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000224950ENST00000369764ENST00000466828ENST00000472951
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000224950 8.932±0.00 4.540±0.00 N/A 4.618±0.00 4.135±2.97 1.387±0.56 5.219±4.50 1.787±0.00 3.096±0.68 7.495±6.15 7.801±0.00 4.210±2.13 5.064±3.20 4.479±0.07
ENST00000369764 N/A 4.453±0.00 2.977±0.00 1.753±0.00 N/A 2.479±0.66 2.533±0.00 3.580±1.71 1.406±0.00 4.543±1.69 2.468±0.00 4.303±2.51 2.876±0.56 2.584±1.35
ENST00000466828 N/A N/A N/A 0.288±0.00 1.017±0.00 N/A N/A N/A N/A N/A N/A 2.116±1.00 1.193±0.00 N/A
ENST00000472951 N/A N/A N/A N/A N/A N/A N/A 0.582±0.00 N/A N/A N/A 5.532±0.00 3.846±0.00 2.911±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UD CIL_0006UD_0001 CGP 10:103594027-103918205
CIL_000663 CIL_000663_0001 CGP 10:103882542-104029233

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000723 IMP telomere maintenance
GO:0000784 IDA:IEA nuclear chromosome, telomeric region
GO:0003676 IEA nucleic acid binding
GO:0003697 ISS single-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005730 IDA nucleolus
GO:0010833 IMP:IEA telomere maintenance via telomere lengthening
GO:0043047 IDA:IEA single-stranded telomeric DNA binding
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0045111 IDA intermediate filament cytoskeleton
GO:0045740 ISS positive regulation of DNA replication
GO:0070188 IEA Stn1-Ten1 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007734 obfc1 oligonucleotide/oligosaccharide-binding fold containing 1 protein_coding Danio_rerio
ENSMUSG00000042694 Obfc1 oligonucleotide/oligosaccharide-binding fold containing 1 protein_coding Mus_musculus

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