C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006UD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107957-ENSG00000107960 CGP 9606 10:103594027-103918205
GeneTranscriptPositionBiotype
ENSG00000107960 (OBFC1)
oligonucleotide/oligosaccharide-binding fold containing 1 		ENST00000224950 (OBFC1-001) 103882542-103918205 protein_coding
ENST00000369764 (OBFC1-002) 103882555-103917669 protein_coding
ENST00000466828 (OBFC1-004) 103882555-103918130 processed_transcript
ENST00000472951 (OBFC1-003) 103882745-103900153 processed_transcript
ENSG00000222503 (Y_RNA)
Y RNA 		ENST00000410571 (Y_RNA.1-805) 103673158-103673265 misc_RNA
ENSG00000260461 (RP11-541N10.3)
 ENST00000568017 (RP11-541N10.3-001) 103877374-103879761 sense_overlapping
ENSG00000273108 (RP11-416N2.4)
 ENST00000609691 (RP11-416N2.4-001) 103608619-103610050 antisense
CIL_0006UD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053617-ENSMUSG00000042694 CGP 10090 19:47260174-47537507
GeneTranscriptPositionBiotype
ENSMUSG00000042694 (Obfc1)
oligonucleotide/oligosaccharide-binding fold containing 1 		ENSMUST00000049369 (Obfc1-001) 47501033-47537119 protein_coding
ENSMUST00000182251 (Obfc1-009) 47524073-47536896 processed_transcript
ENSMUST00000182291 (Obfc1-006) 47524707-47537507 protein_coding
ENSMUST00000182431 (Obfc1-010) 47522132-47536964 processed_transcript
ENSMUST00000182654 (Obfc1-008) 47532352-47536262 processed_transcript
ENSMUST00000182714 (Obfc1-007) 47535915-47537046 retained_intron
ENSMUST00000182808 (Obfc1-002) 47507205-47537036 protein_coding
ENSMUST00000182873 (Obfc1-005) 47501038-47508773 processed_transcript
ENSMUST00000183004 (Obfc1-003) 47524202-47537094 retained_intron
ENSMUST00000183283 (Obfc1-004) 47536290-47537024 processed_transcript
ENSMUSG00000053617 (Sh3pxd2a)
SH3 and PX domains 2A 		ENSMUST00000081619 (Sh3pxd2a-201) 47260174-47464411 protein_coding
ENSMUST00000111800 (Sh3pxd2a-202) 47260174-47464411 protein_coding
ENSMUSG00000097990 (Gm19557)
predicted gene, 19557 		ENSMUST00000182109 (Gm19557-001) 47512982-47516578 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UD_0001ENSG00000107960ENST00000224950ENST00000369764ENST00000466828ENST00000472951ENSG00000222503ENST00000410571ENSG00000260461ENST00000568017ENSG00000273108ENST00000609691CIL_0006UD_0002ENSMUSG00000042694ENSMUST00000049369ENSMUST00000182251ENSMUST00000182291ENSMUST00000182431ENSMUST00000182654ENSMUST00000182714ENSMUST00000182808ENSMUST00000182873ENSMUST00000183004ENSMUST00000183283ENSMUSG00000053617ENSMUST00000081619ENSMUST00000111800ENSMUSG00000097990ENSMUST00000182109
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UD_0001ENSG00000107960ENST00000224950ENST00000369764ENST00000466828ENST00000472951ENSG00000222503ENST00000410571ENSG00000260461ENST00000568017ENSG00000273108ENST00000609691CIL_0006UD_0002ENSMUSG00000042694ENSMUST00000049369ENSMUST00000182808ENSMUST00000182873ENSMUSG00000053617ENSMUST00000081619ENSMUST00000111800ENSMUSG00000097990ENSMUST00000182109
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107960 ENST00000224950 8.932±0.00 4.540±0.00 N/A 4.618±0.00 4.135±2.97 1.387±0.56 5.219±4.50 1.787±0.00 3.096±0.68 7.495±6.15 7.801±0.00 4.210±2.13 5.064±3.20 4.479±0.07
ENST00000369764 N/A 4.453±0.00 2.977±0.00 1.753±0.00 N/A 2.479±0.66 2.533±0.00 3.580±1.71 1.406±0.00 4.543±1.69 2.468±0.00 4.303±2.51 2.876±0.56 2.584±1.35
ENST00000466828 N/A N/A N/A 0.288±0.00 1.017±0.00 N/A N/A N/A N/A N/A N/A 2.116±1.00 1.193±0.00 N/A
ENST00000472951 N/A N/A N/A N/A N/A N/A N/A 0.582±0.00 N/A N/A N/A 5.532±0.00 3.846±0.00 2.911±0.00
ENSG00000222503 ENST00000410571 N/A N/A N/A N/A N/A N/A 0.329±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000260461 ENST00000568017 0.715±0.00 1.712±0.00 0.564±0.00 0.142±0.00 0.463±0.34 0.611±0.12 0.053±0.00 1.244±0.76 0.109±0.06 1.267±1.00 0.396±0.00 0.669±0.50 1.012±0.12 1.195±0.31
ENSG00000273108 ENST00000609691 N/A 0.754±0.00 N/A 1.865±0.00 0.138±0.00 0.055±0.00 0.107±0.00 N/A 0.043±0.00 0.159±0.00 0.121±0.00 0.588±0.58 0.210±0.05 0.523±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042694 ENSMUST00000049369 3.489±0.55 0.597±0.00 4.062±0.63 4.912±0.95 2.162±0.96 0.883±0.24 2.380±0.21 1.730±0.54 1.869±1.41 2.335±0.30 1.463±0.30 4.121±1.80 9.986±5.54 4.740±0.87
ENSMUST00000182251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182808 1.027±0.00 0.730±0.00 N/A N/A N/A 0.901±0.00 N/A 0.664±0.00 0.483±0.04 N/A 0.226±0.00 2.176±0.00 N/A N/A
ENSMUST00000182873 7.669±2.69 5.272±1.43 4.014±0.00 5.705±2.11 5.726±0.78 7.295±1.40 3.327±1.10 3.994±0.30 1.672±0.71 7.577±1.49 1.153±0.06 12.375±3.02 13.426±8.97 6.066±2.40
ENSMUST00000183004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000053617 ENSMUST00000081619 N/A N/A 8.179±0.00 1.216±0.00 6.313±0.00 3.647±1.99 5.662±0.77 2.012±1.07 1.552±1.10 10.231±5.41 7.872±0.73 2.592±0.26 3.631±2.38 0.410±0.19
ENSMUST00000111800 N/A N/A N/A 2.574±1.69 N/A N/A N/A N/A 0.592±0.30 N/A N/A N/A 0.901±0.00 0.145±0.06
ENSMUSG00000097990 ENSMUST00000182109 0.886±0.00 0.560±0.12 4.621±0.34 N/A N/A 0.523±0.03 0.351±0.08 0.464±0.22 0.173±0.03 1.359±0.53 0.154±0.00 1.250±0.45 1.720±0.48 0.741±0.00

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