C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000663_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107960-ENSG00000065613 CGP 9606 10:103882542-104029233
GeneTranscriptPositionBiotype
ENSG00000065613 (SLK)
STE20-like kinase 		ENST00000335753 (SLK-001) 103967201-104029233 protein_coding
ENST00000369755 (SLK-002) 103967201-104029233 protein_coding
ENST00000474260 (SLK-003) 104008198-104019116 processed_transcript
ENSG00000107960 (OBFC1)
oligonucleotide/oligosaccharide-binding fold containing 1 		ENST00000224950 (OBFC1-001) 103882542-103918205 protein_coding
ENST00000369764 (OBFC1-002) 103882555-103917669 protein_coding
ENST00000466828 (OBFC1-004) 103882555-103918130 processed_transcript
ENST00000472951 (OBFC1-003) 103882745-103900153 processed_transcript
ENSG00000266754 (RN7SL524P)
RNA, 7SL, cytoplasmic 524, pseudogene 		ENST00000581152 (RN7SL524P-201) 103974515-103974814 misc_RNA
CIL_000663_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042694-ENSMUSG00000025060 CGP 10090 19:47501033-47645246
GeneTranscriptPositionBiotype
ENSMUSG00000025060 (Slk)
STE20-like kinase 		ENSMUST00000026043 (Slk-001) 47579678-47645246 protein_coding
ENSMUST00000051691 (Slk-002) 47580019-47642455 protein_coding
ENSMUST00000123816 (Slk-003) 47620670-47625354 retained_intron
ENSMUST00000130115 (Slk-005) 47622658-47625854 retained_intron
ENSMUST00000147841 (Slk-004) 47635130-47636454 retained_intron
ENSMUSG00000042694 (Obfc1)
oligonucleotide/oligosaccharide-binding fold containing 1 		ENSMUST00000049369 (Obfc1-001) 47501033-47537119 protein_coding
ENSMUST00000182251 (Obfc1-009) 47524073-47536896 processed_transcript
ENSMUST00000182291 (Obfc1-006) 47524707-47537507 protein_coding
ENSMUST00000182431 (Obfc1-010) 47522132-47536964 processed_transcript
ENSMUST00000182654 (Obfc1-008) 47532352-47536262 processed_transcript
ENSMUST00000182714 (Obfc1-007) 47535915-47537046 retained_intron
ENSMUST00000182808 (Obfc1-002) 47507205-47537036 protein_coding
ENSMUST00000182873 (Obfc1-005) 47501038-47508773 processed_transcript
ENSMUST00000183004 (Obfc1-003) 47524202-47537094 retained_intron
ENSMUST00000183283 (Obfc1-004) 47536290-47537024 processed_transcript
ENSMUSG00000086121 (Gm16068)
predicted gene 16068 		ENSMUST00000136557 (Gm16068-001) 47606144-47617106 antisense
ENSMUSG00000097990 (Gm19557)
predicted gene, 19557 		ENSMUST00000182109 (Gm19557-001) 47512982-47516578 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000663_0001ENSG00000065613ENST00000335753ENST00000369755ENST00000474260ENSG00000107960ENST00000224950ENST00000369764ENST00000466828ENST00000472951ENSG00000266754ENST00000581152CIL_000663_0002ENSMUSG00000025060ENSMUST00000026043ENSMUST00000051691ENSMUST00000123816ENSMUST00000130115ENSMUST00000147841ENSMUSG00000042694ENSMUST00000049369ENSMUST00000182251ENSMUST00000182291ENSMUST00000182431ENSMUST00000182654ENSMUST00000182714ENSMUST00000182808ENSMUST00000182873ENSMUST00000183004ENSMUST00000183283ENSMUSG00000086121ENSMUST00000136557ENSMUSG00000097990ENSMUST00000182109
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000663_0001ENSG00000065613ENST00000335753ENST00000369755ENSG00000107960ENST00000224950ENST00000369764ENST00000466828ENST00000472951ENSG00000266754ENST00000581152CIL_000663_0002ENSMUSG00000025060ENSMUST00000026043ENSMUST00000051691ENSMUSG00000042694ENSMUST00000049369ENSMUST00000182808ENSMUST00000182873ENSMUSG00000086121ENSMUST00000136557ENSMUSG00000097990ENSMUST00000182109
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000065613 ENST00000335753 12.210±0.00 6.987±0.00 0.751±0.00 6.474±1.63 5.766±0.30 7.243±4.25 5.824±2.73 2.157±0.71 6.038±5.27 8.534±1.14 4.977±3.70 6.953±1.35 5.223±2.49 9.529±1.67
ENST00000369755 N/A N/A 3.013±0.00 1.450±0.00 1.240±0.00 2.765±0.00 N/A 5.505±2.72 2.315±0.73 1.803±0.00 N/A 6.084±4.07 2.493±1.17 2.447±0.00
ENST00000474260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000107960 ENST00000224950 8.932±0.00 4.540±0.00 N/A 4.618±0.00 4.135±2.97 1.387±0.56 5.219±4.50 1.787±0.00 3.096±0.68 7.495±6.15 7.801±0.00 4.210±2.13 5.064±3.20 4.479±0.07
ENST00000369764 N/A 4.453±0.00 2.977±0.00 1.753±0.00 N/A 2.479±0.66 2.533±0.00 3.580±1.71 1.406±0.00 4.543±1.69 2.468±0.00 4.303±2.51 2.876±0.56 2.584±1.35
ENST00000466828 N/A N/A N/A 0.288±0.00 1.017±0.00 N/A N/A N/A N/A N/A N/A 2.116±1.00 1.193±0.00 N/A
ENST00000472951 N/A N/A N/A N/A N/A N/A N/A 0.582±0.00 N/A N/A N/A 5.532±0.00 3.846±0.00 2.911±0.00
ENSG00000266754 ENST00000581152 0.697±0.00 1.718±0.00 1.206±0.00 0.481±0.28 1.627±1.39 1.832±1.27 0.234±0.08 0.500±0.00 N/A 1.332±1.26 0.485±0.00 0.354±0.15 0.276±0.00 0.566±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025060 ENSMUST00000026043 5.092±2.90 N/A 16.421±0.95 6.660±1.28 2.823±1.23 9.040±0.45 5.546±2.73 2.167±0.27 9.396±4.08 10.430±4.50 5.231±0.80 8.416±1.86 8.383±2.86 1.642±0.74
ENSMUST00000051691 N/A N/A N/A 13.920±0.00 N/A N/A N/A N/A 2.496±0.65 N/A N/A 7.388±4.89 22.411±14.38 4.259±5.47
ENSMUST00000123816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042694 ENSMUST00000049369 3.489±0.55 0.597±0.00 4.062±0.63 4.912±0.95 2.162±0.96 0.883±0.24 2.380±0.21 1.730±0.54 1.869±1.41 2.335±0.30 1.463±0.30 4.121±1.80 9.986±5.54 4.740±0.87
ENSMUST00000182251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182808 1.027±0.00 0.730±0.00 N/A N/A N/A 0.901±0.00 N/A 0.664±0.00 0.483±0.04 N/A 0.226±0.00 2.176±0.00 N/A N/A
ENSMUST00000182873 7.669±2.69 5.272±1.43 4.014±0.00 5.705±2.11 5.726±0.78 7.295±1.40 3.327±1.10 3.994±0.30 1.672±0.71 7.577±1.49 1.153±0.06 12.375±3.02 13.426±8.97 6.066±2.40
ENSMUST00000183004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086121 ENSMUST00000136557 N/A N/A 0.051±0.03 0.141±0.09 N/A 0.202±0.00 0.131±0.04 0.093±0.00 0.201±0.12 0.239±0.00 N/A N/A 0.140±0.01 0.151±0.05
ENSMUSG00000097990 ENSMUST00000182109 0.886±0.00 0.560±0.12 4.621±0.34 N/A N/A 0.523±0.03 0.351±0.08 0.464±0.22 0.173±0.03 1.359±0.53 0.154±0.00 1.250±0.45 1.720±0.48 0.741±0.00

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