C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LUC7-like 3 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108848 LUC7L3 9606 + 17:50719544-50756213 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000240304 LUC7L3-002 50719603-50752709 protein_coding
  ENST00000393227 LUC7L3-004 50719599-50751617 protein_coding
  ENST00000503728 LUC7L3-026 50746619-50752585 protein_coding
  ENST00000503798 LUC7L3-028 50751051-50752550 processed_transcript
  ENST00000504065 LUC7L3-019 50744661-50750847 nonsense_mediated_decay
  ENST00000504563 LUC7L3-009 50719599-50743792 nonsense_mediated_decay
  ENST00000505619 LUC7L3-011 50719629-50741712 protein_coding
  ENST00000505658 LUC7L3-001 50719544-50756213 protein_coding
  ENST00000506686 LUC7L3-007 50719598-50738196 nonsense_mediated_decay
  ENST00000507200 LUC7L3-013 50719802-50743799 nonsense_mediated_decay
  ENST00000507503 LUC7L3-015 50740267-50744808 retained_intron
  ENST00000508045 LUC7L3-003 50719570-50744813 nonsense_mediated_decay
  ENST00000508218 LUC7L3-006 50719597-50741292 retained_intron
  ENST00000508482 LUC7L3-005 50719629-50751004 nonsense_mediated_decay
  ENST00000509335 LUC7L3-008 50719598-50741149 nonsense_mediated_decay
  ENST00000509487 LUC7L3-020 50745906-50751013 nonsense_mediated_decay
  ENST00000510984 LUC7L3-012 50719647-50741232 protein_coding
  ENST00000511068 LUC7L3-018 50743672-50744789 retained_intron
  ENST00000511974 LUC7L3-021 50746575-50751569 protein_coding
  ENST00000512549 LUC7L3-027 50748389-50750550 processed_transcript
  ENST00000513025 LUC7L3-025 50736635-50741673 protein_coding
  ENST00000513969 LUC7L3-022 50746614-50752282 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000240304ENST00000393227ENST00000504065ENST00000504563ENST00000505658ENST00000507503ENST00000508045ENST00000508218ENST00000508482
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000240304 7.901±0.00 9.019±0.00 N/A 6.978±0.00 12.248±0.00 32.224±0.00 4.240±0.00 24.121±0.00 6.822±0.00 9.423±0.00 5.858±0.00 32.942±16.48 12.345±8.53 24.369±0.10
ENST00000393227 N/A 10.667±0.00 2.442±0.00 5.090±0.00 N/A N/A 2.930±0.00 1.271±0.00 2.583±0.00 5.494±0.00 N/A 38.354±0.00 2.060±0.62 28.626±0.00
ENST00000504065 15.166±0.00 23.878±0.00 N/A 11.272±0.00 24.373±0.00 59.548±0.00 N/A N/A N/A N/A N/A 50.671±0.00 12.302±0.00 26.319±0.40
ENST00000504563 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.920±0.00 N/A N/A N/A N/A
ENST00000505658 0.884±0.00 N/A 1.336±0.00 4.827±0.00 3.173±0.51 3.631±0.00 0.894±0.28 4.035±0.00 1.982±0.00 4.141±0.00 N/A 9.840±7.68 0.697±0.21 6.329±4.24
ENST00000507503 N/A N/A 17.779±0.00 N/A N/A N/A 4.983±0.00 N/A 12.108±0.00 13.821±0.00 2.261±0.00 N/A N/A N/A
ENST00000508045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.561±0.00 N/A N/A N/A
ENST00000508218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.582±0.00 N/A N/A N/A
ENST00000508482 10.253±0.00 21.715±0.00 N/A 12.792±0.00 19.817±0.00 38.603±0.00 4.993±0.00 N/A N/A 12.954±0.00 5.663±0.00 N/A 9.531±0.00 15.981±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003729 IEA:IMP mRNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005685 IEA U1 snRNP
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0006376 IEA mRNA splice site selection
GO:0008380 IMP RNA splicing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014366 luc7l3 LUC7-like 3 (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000020863 Luc7l3 LUC7-like 3 (S. cerevisiae) protein_coding Mus_musculus

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