C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LUC7-like 3 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000240304 LUC7L3-002 ENSG00000108848 9606 + 17:50719603-50752709 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000240304
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000240304 7.901±0.00 9.019±0.00 6.978±0.00 12.248±0.00 32.224±0.00 4.240±0.00 24.121±0.00 6.822±0.00 9.423±0.00 5.858±0.00 32.942±16.48 12.345±8.53 24.369±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003729 IEA:IMP mRNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005685 IEA U1 snRNP
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0006376 IEA mRNA splice site selection
GO:0008380 IMP RNA splicing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107821 Luc7l3-002 protein_coding Mus_musculus 0 2573
ENSMUST00000107820 Luc7l3-003 protein_coding Mus_musculus 0 1997
ENSMUST00000021226 Luc7l3-001 protein_coding Mus_musculus 0 1897
ENSMUST00000166312 Luc7l3-004 protein_coding Mus_musculus 0 1897
ENSMUST00000107822 Luc7l3-009 nonsense_mediated_decay Mus_musculus 0 1587
ENSMUST00000132623 Luc7l3-010 protein_coding Mus_musculus 0 734
ENSMUST00000165620 Luc7l3-008 retained_intron Mus_musculus 0 497
ENSMUST00000171033 Luc7l3-007 retained_intron Mus_musculus 0 438
ENSMUST00000135311 Luc7l3-006 processed_transcript Mus_musculus 0 429
ENSMUST00000138369 Luc7l3-005 nonsense_mediated_decay Mus_musculus 0 342

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