C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LUC7-like 3 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393227 LUC7L3-004 ENSG00000108848 9606 + 17:50719599-50751617 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainHeartKidneyLiverLungOvaryPlacentaTestisENST00000393227
Transcript ID Adrenal Bladder Brain Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000393227 10.667±0.00 2.442±0.00 5.090±0.00 2.930±0.00 1.271±0.00 2.583±0.00 5.494±0.00 38.354±0.00 2.060±0.62 28.626±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003729 IEA mRNA binding
GO:0005634 IDA nucleus
GO:0005685 IEA U1 snRNP
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0006376 IEA mRNA splice site selection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021226 Luc7l3-001 protein_coding Mus_musculus 0 3291
ENSMUST00000166312 Luc7l3-004 protein_coding Mus_musculus 0 2093
ENSMUST00000107822 Luc7l3-009 nonsense_mediated_decay Mus_musculus 0 1906
ENSMUST00000107820 Luc7l3-003 protein_coding Mus_musculus 0 1901
ENSMUST00000107821 Luc7l3-002 protein_coding Mus_musculus 0 1901
ENSMUST00000132623 Luc7l3-010 protein_coding Mus_musculus 0 924
ENSMUST00000165620 Luc7l3-008 retained_intron Mus_musculus 0 497
ENSMUST00000171033 Luc7l3-007 retained_intron Mus_musculus 0 438
ENSMUST00000135311 Luc7l3-006 processed_transcript Mus_musculus 0 429
ENSMUST00000138369 Luc7l3-005 nonsense_mediated_decay Mus_musculus 0 339

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