C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LUC7-like 3 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504065 LUC7L3-019 ENSG00000108848 9606 + 17:50744661-50750847 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonOvaryPlacentaTestisENST00000504065
Transcript ID Adipose Adrenal Brain Breast Colon Ovary Placenta Testis
ENST00000504065 15.166±0.00 23.878±0.00 11.272±0.00 24.373±0.00 59.548±0.00 50.671±0.00 12.302±0.00 26.319±0.40

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003729 IEA mRNA binding
GO:0005634 IDA nucleus
GO:0005685 IEA U1 snRNP
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0006376 IEA mRNA splice site selection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107822 Luc7l3-009 nonsense_mediated_decay Mus_musculus 0 856
ENSMUST00000107820 Luc7l3-003 protein_coding Mus_musculus 0 856
ENSMUST00000021226 Luc7l3-001 protein_coding Mus_musculus 0 856
ENSMUST00000107821 Luc7l3-002 protein_coding Mus_musculus 0 856
ENSMUST00000166312 Luc7l3-004 protein_coding Mus_musculus 0 856
ENSMUST00000132623 Luc7l3-010 protein_coding Mus_musculus 0 501
ENSMUST00000171033 Luc7l3-007 retained_intron Mus_musculus 0 431
ENSMUST00000135311 Luc7l3-006 processed_transcript Mus_musculus 0 422
ENSMUST00000165620 Luc7l3-008 retained_intron Mus_musculus 0 366
ENSMUST00000138369 Luc7l3-005 nonsense_mediated_decay Mus_musculus 7.00649e-45 185

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