C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: diphthamide biosynthesis 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108963 DPH1 9606 + 17:2030110-2043430 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263083 DPH1-001 2030110-2043430 protein_coding
  ENST00000263084 DPH1-019 2041553-2042628 nonsense_mediated_decay
  ENST00000570477 DPH1-003 2033393-2042965 protein_coding
  ENST00000570833 DPH1-014 2033820-2039787 nonsense_mediated_decay
  ENST00000570867 DPH1-005 2038965-2043424 retained_intron
  ENST00000571418 DPH1-007 2030159-2043024 protein_coding
  ENST00000571710 DPH1-009 2040340-2043424 protein_coding
  ENST00000572214 DPH1-013 2036895-2042703 retained_intron
  ENST00000572248 DPH1-016 2041281-2042690 retained_intron
  ENST00000572684 DPH1-006 2040672-2043424 retained_intron
  ENST00000572819 DPH1-011 2030167-2037181 retained_intron
  ENST00000575162 DPH1-017 2041534-2042919 protein_coding
  ENST00000575667 DPH1-002 2030159-2043024 nonsense_mediated_decay
  ENST00000575998 DPH1-012 2039553-2040481 retained_intron
  ENST00000576129 DPH1-015 2030186-2037283 retained_intron
  ENST00000576891 DPH1-010 2034886-2036956 processed_transcript
  ENST00000607788 DPH1-018 2041102-2043421 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263083ENST00000570833ENST00000570867ENST00000571418ENST00000571710ENST00000572684ENST00000575162ENST00000575667ENST00000575998
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263083 N/A N/A 2.612±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570833 N/A N/A N/A 2.227±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570867 N/A N/A 2.739±0.00 N/A 0.564±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571418 4.961±0.00 N/A 7.211±0.00 12.322±0.00 2.910±0.00 5.320±0.00 11.447±0.00 7.170±0.00 N/A 15.809±0.00 14.133±0.00 7.003±0.00 N/A
ENST00000571710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.418±3.98 N/A N/A
ENST00000572684 N/A 0.731±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 7.909±0.00 N/A 5.127±0.00
ENST00000575162 11.607±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.930±0.00
ENST00000575667 N/A N/A N/A 0.898±0.00 2.923±0.00 0.389±0.00 N/A N/A 0.695±0.00 6.012±0.00 N/A 7.826±1.59 N/A
ENST00000575998 N/A 3.375±0.00 N/A N/A N/A N/A N/A N/A 4.024±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093G CIL_00093G_0001 VISTA 17:1876478-2477942
CIL_0007RP CIL_0007RP_0001 VISTA 17:1878704-2480995
CIL_0007KQ CIL_0007KQ_0001 UCNEbase 17:1996571-2212289

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008283 IEA cell proliferation
GO:0017183 IEA peptidyl-diphthamide biosynthetic process from peptidyl-histidine

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057973 dph1 DPH1 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000078789 Dph1 DPH1 homolog (S. cerevisiae) protein_coding Mus_musculus

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