C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: diphthamide biosynthesis 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000571710 DPH1-009 ENSG00000108963 9606 + 17:2040340-2043424 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000571710
Transcript ID Ovary
ENST00000571710 7.418±3.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093G CIL_00093G_0001 VISTA 17:1876478-2477942
CIL_0007RP CIL_0007RP_0001 VISTA 17:1878704-2480995
CIL_0007KQ CIL_0007KQ_0001 UCNEbase 17:1996571-2212289

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0017183 IEA peptidyl-diphthamide biosynthetic process from peptidyl-histidine

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044949 Dph1-001 protein_coding Mus_musculus 0 484
ENSMUST00000123489 Ovca2-002 processed_transcript Mus_musculus 0 483
ENSMUST00000071562 Ovca2-001 protein_coding Mus_musculus 0 483
ENSMUST00000156489 Dph1-004 retained_intron Mus_musculus 0 483
ENSMUST00000150910 Dph1-003 processed_transcript Mus_musculus 0 346
ENSMUST00000148944 Dph1-005 processed_transcript Mus_musculus 0 344

Loading