C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB34, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109113 RAB34 9606 - 17:28714284-28718429 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301043 RAB34-001 28714284-28718415 protein_coding
  ENST00000353676 RAB34-004 28714873-28718222 protein_coding
  ENST00000395242 RAB34-006 28714298-28717851 protein_coding
  ENST00000395243 RAB34-005 28714284-28717748 protein_coding
  ENST00000395245 RAB34-018 28714314-28717893 protein_coding
  ENST00000412625 RAB34-009 28714873-28718429 protein_coding
  ENST00000415040 RAB34-007 28714285-28718183 protein_coding
  ENST00000419712 RAB34-019 28715260-28718167 protein_coding
  ENST00000422279 RAB34-014 28714291-28717393 nonsense_mediated_decay
  ENST00000430132 RAB34-010 28714647-28718405 protein_coding
  ENST00000436730 RAB34-003 28714625-28718161 protein_coding
  ENST00000450529 RAB34-008 28714285-28718165 protein_coding
  ENST00000453384 RAB34-002 28714284-28718267 protein_coding
  ENST00000474704 RAB34-017 28714299-28715718 retained_intron
  ENST00000481501 RAB34-013 28715439-28716373 retained_intron
  ENST00000482688 RAB34-012 28716756-28718167 retained_intron
  ENST00000483554 RAB34-011 28716237-28717707 retained_intron
  ENST00000484161 RAB34-016 28714287-28715485 retained_intron
  ENST00000496866 RAB34-015 28714906-28715518 retained_intron
  ENST00000580843 RAB34-020 28716053-28718167 protein_coding
  ENST00000582934 RAB34-021 28716903-28718167 protein_coding
  ENST00000583538 RAB34-022 28714673-28718167 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301043ENST00000353676ENST00000395242ENST00000395243ENST00000395245ENST00000412625ENST00000415040ENST00000419712ENST00000430132ENST00000436730ENST00000450529ENST00000474704ENST00000483554ENST00000484161ENST00000583538
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301043 N/A N/A N/A N/A N/A N/A N/A N/A 1.041±0.00 N/A N/A 21.199±0.00 N/A N/A
ENST00000353676 N/A N/A N/A 1.148±0.00 1.561±0.00 N/A N/A N/A N/A N/A N/A 63.488±0.00 N/A N/A
ENST00000395242 6.909±0.00 N/A N/A 4.478±0.00 N/A 11.803±0.00 2.011±0.00 9.763±0.00 N/A 7.577±7.23 1.605±0.00 19.899±16.70 N/A 5.117±0.00
ENST00000395243 N/A N/A N/A N/A N/A N/A 1.692±0.00 N/A 0.558±0.00 N/A N/A 24.175±0.00 6.765±0.14 5.615±0.00
ENST00000395245 11.035±0.00 10.964±0.00 N/A N/A 10.553±0.00 N/A 1.117±0.00 13.335±0.00 1.730±0.00 N/A N/A 23.417±0.00 8.578±3.18 N/A
ENST00000412625 N/A N/A N/A N/A 0.744±0.00 N/A 0.493±0.00 N/A N/A 1.219±0.00 N/A 3.817±0.00 N/A N/A
ENST00000415040 N/A 5.949±0.00 N/A N/A 5.584±0.00 15.165±0.00 2.674±0.00 16.350±0.00 2.434±0.00 29.626±0.00 0.604±0.00 27.426±3.55 6.366±2.69 8.478±4.92
ENST00000419712 N/A N/A N/A 8.494±0.00 N/A N/A N/A N/A N/A N/A N/A 92.548±0.00 34.297±0.00 6.670±0.00
ENST00000430132 N/A N/A N/A 0.864±0.00 N/A N/A N/A 1.023±0.00 N/A N/A N/A N/A 6.553±0.00 4.110±0.00
ENST00000436730 10.095±0.00 11.756±0.00 N/A 4.828±0.00 1.871±0.00 10.057±9.24 N/A N/A 2.397±0.00 N/A N/A N/A N/A 9.451±0.00
ENST00000450529 N/A 9.077±0.00 N/A N/A N/A N/A N/A N/A N/A 0.375±0.00 1.098±0.00 23.292±0.00 N/A 8.545±0.00
ENST00000474704 N/A N/A 0.722±0.00 N/A N/A N/A N/A N/A N/A 1.179±0.00 N/A N/A N/A N/A
ENST00000483554 N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484161 N/A N/A 0.912±0.00 1.104±0.00 N/A 0.408±0.00 N/A N/A N/A N/A 1.359±0.00 27.659±0.00 N/A N/A
ENST00000583538 N/A N/A N/A 1.407±0.00 N/A N/A N/A N/A N/A N/A 2.085±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DE CIL_0000DE_0002 CGP 17:28714284-28724359

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001726 IEA ruffle
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005769 IEA early endosome
GO:0005794 IDA Golgi apparatus
GO:0005795 IDA Golgi stack
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006897 IEA endocytosis
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0019001 IEA guanyl nucleotide binding
GO:0019882 IMP antigen processing and presentation
GO:0031982 IDA vesicle
GO:0031985 IDA Golgi cisterna
GO:0032418 IDA lysosome localization
GO:0043001 IDA Golgi to plasma membrane protein transport
GO:0045335 IDA phagocytic vesicle
GO:0048471 IDA perinuclear region of cytoplasm
GO:0070062 IDA extracellular vesicular exosome
GO:0072659 IDA protein localization to plasma membrane
GO:0090382 IMP phagosome maturation
GO:0090385 IMP phagosome-lysosome fusion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010977 rab34b RAB34, member RAS oncogene family b protein_coding Danio_rerio
ENSDARG00000045628 rab34a RAB34, member RAS oncogene family a protein_coding Danio_rerio
ENSMUSG00000002059 Rab34 RAB34, member RAS oncogene family protein_coding Mus_musculus

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