C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110455 ACCS 9606 + 11:44065925-44084222 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263776 ACCS-001 44066268-44084214 protein_coding
  ENST00000524990 ACCS-005 44066179-44073517 protein_coding
  ENST00000526577 ACCS-008 44066536-44077445 retained_intron
  ENST00000527346 ACCS-004 44075531-44084222 retained_intron
  ENST00000527557 ACCS-014 44079529-44082181 retained_intron
  ENST00000527603 ACCS-002 44066524-44075856 retained_intron
  ENST00000531190 ACCS-013 44079338-44083208 retained_intron
  ENST00000531505 ACCS-009 44080510-44083270 retained_intron
  ENST00000531940 ACCS-007 44074630-44079607 retained_intron
  ENST00000532122 ACCS-011 44079338-44082120 retained_intron
  ENST00000533208 ACCS-003 44065925-44077699 processed_transcript
  ENST00000533404 ACCS-006 44067129-44067859 protein_coding
  ENST00000534035 ACCS-012 44081018-44083893 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263776ENST00000526577ENST00000527346ENST00000527603ENST00000531940ENST00000533208ENST00000534035
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263776 0.686±0.00 1.954±0.00 N/A 0.076±0.00 1.601±0.00 0.440±0.00 0.405±0.00 0.554±0.00 1.241±0.00 1.964±0.00 N/A 4.350±2.56 0.951±0.11 N/A
ENST00000526577 N/A N/A 2.152±0.00 N/A 1.496±0.00 N/A N/A N/A 1.474±0.00 N/A N/A 1.177±0.00 N/A 2.393±0.00
ENST00000527346 0.247±0.00 2.139±0.00 N/A 0.126±0.00 1.258±0.13 0.132±0.00 0.187±0.11 0.354±0.00 0.415±0.00 0.505±0.00 0.069±0.00 2.494±1.80 0.285±0.00 2.069±0.00
ENST00000527603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.951±0.00 N/A N/A N/A
ENST00000531940 0.312±0.00 N/A N/A 0.268±0.00 1.617±0.67 N/A N/A 0.539±0.00 N/A 0.869±0.00 1.432±0.00 3.652±1.41 N/A 2.095±0.00
ENST00000533208 N/A N/A N/A N/A N/A N/A 0.395±0.00 N/A N/A N/A 0.321±0.00 N/A N/A N/A
ENST00000534035 N/A N/A N/A N/A N/A N/A N/A N/A 2.181±0.00 N/A 0.412±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UN CIL_0008UN_0001 VISTA 11:43968377-44572214

Gene Ontology
GO IDEvidence TypeGO Description
GO:0009058 IEA biosynthetic process
GO:0030170 NAS:IEA pyridoxal phosphate binding
GO:0042803 NAS protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052124 accs 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) protein_coding Danio_rerio
ENSMUSG00000040272 Accs 1-aminocyclopropane-1-carboxylate synthase (non-functional) protein_coding Mus_musculus

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