C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527346 ACCS-004 ENSG00000110455 9606 + 11:44075531-44084222 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000527346
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000527346 0.247±0.00 2.139±0.00 0.126±0.00 1.258±0.13 0.132±0.00 0.187±0.11 0.354±0.00 0.415±0.00 0.505±0.00 0.069±0.00 2.494±1.80 0.285±0.00 2.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UN CIL_0008UN_0001 VISTA 11:43968377-44572214

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041593 Accs-002 protein_coding Mus_musculus 0 660
ENSMUST00000068513 Accs-003 protein_coding Mus_musculus 0 660
ENSMUST00000111246 Accs-001 protein_coding Mus_musculus 0 660
ENSMUST00000146045 Accs-011 retained_intron Mus_musculus 0 593

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