C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263776 ACCS-001 ENSG00000110455 9606 + 11:44066268-44084214 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000263776
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000263776 0.686±0.00 1.954±0.00 0.076±0.00 1.601±0.00 0.440±0.00 0.405±0.00 0.554±0.00 1.241±0.00 1.964±0.00 4.350±2.56 0.951±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UN CIL_0008UN_0001 VISTA 11:43968377-44572214

Gene Ontology

GO IDEvidence TypeGO Description
GO:0009058 IEA biosynthetic process
GO:0030170 NAS:IEA pyridoxal phosphate binding
GO:0042803 NAS protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068513 Accs-003 protein_coding Mus_musculus 0 1434
ENSMUST00000041593 Accs-002 protein_coding Mus_musculus 0 1432
ENSMUST00000111246 Accs-001 protein_coding Mus_musculus 0 1432
ENSMUST00000146045 Accs-011 retained_intron Mus_musculus 0 575
ENSMUST00000130077 Accs-007 protein_coding Mus_musculus 0 488
ENSMUST00000141413 Accs-006 retained_intron Mus_musculus 0 440
ENSMUST00000149073 Accs-005 retained_intron Mus_musculus 0 440
ENSMUST00000146436 Accs-004 retained_intron Mus_musculus 0 435
ENSMUST00000150666 Accs-008 nonsense_mediated_decay Mus_musculus 0 252

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