C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526577 ACCS-008 ENSG00000110455 9606 + 11:44066536-44077445 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastLiverOvaryTestisENST00000526577
Transcript ID Bladder Breast Liver Ovary Testis
ENST00000526577 2.152±0.00 1.496±0.00 1.474±0.00 1.177±0.00 2.393±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UN CIL_0008UN_0001 VISTA 11:43968377-44572214

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068513 Accs-003 protein_coding Mus_musculus 0 538
ENSMUST00000041593 Accs-002 protein_coding Mus_musculus 0 536
ENSMUST00000111246 Accs-001 protein_coding Mus_musculus 0 536
ENSMUST00000130077 Accs-007 protein_coding Mus_musculus 0 411
ENSMUST00000141413 Accs-006 retained_intron Mus_musculus 0 363
ENSMUST00000149073 Accs-005 retained_intron Mus_musculus 0 363
ENSMUST00000146436 Accs-004 retained_intron Mus_musculus 0 357
ENSMUST00000150666 Accs-008 nonsense_mediated_decay Mus_musculus 9.99967e-42 174

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