C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | 2-oxoglutarate and iron-dependent oxygenase domain containing 2 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000111325  |
OGFOD2 | 9606 | + |
12:122974580-122980043  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000228922 |
OGFOD2-006 | 122975220-122980041 | protein_coding | ||
| ENST00000397389 |
OGFOD2-001 | 122974580-122980042 | protein_coding | ||
| ENST00000406539 |
OGFOD2-014 | 122974742-122979533 | retained_intron | ||
| ENST00000420319 |
OGFOD2-005 | 122975242-122977653 | retained_intron | ||
| ENST00000454694 |
OGFOD2-008 | 122974971-122979762 | protein_coding | ||
| ENST00000535970 |
OGFOD2-024 | 122974838-122978569 | processed_transcript | ||
| ENST00000536150 |
OGFOD2-009 | 122974727-122980043 | protein_coding | ||
| ENST00000536439 |
OGFOD2-020 | 122977425-122979265 | protein_coding | ||
| ENST00000536615 |
OGFOD2-016 | 122974680-122978988 | processed_transcript | ||
| ENST00000537966 |
OGFOD2-017 | 122975239-122976970 | protein_coding | ||
| ENST00000538628 |
OGFOD2-011 | 122974752-122979438 | protein_coding | ||
| ENST00000538755 |
OGFOD2-007 | 122974703-122979762 | protein_coding | ||
| ENST00000540324 |
OGFOD2-002 | 122975252-122980040 | nonsense_mediated_decay | ||
| ENST00000541360 |
OGFOD2-022 | 122975252-122978056 | processed_transcript | ||
| ENST00000542037 |
OGFOD2-018 | 122976128-122978981 | retained_intron | ||
| ENST00000542117 |
OGFOD2-023 | 122974778-122979005 | processed_transcript | ||
| ENST00000542940 |
OGFOD2-015 | 122975464-122978849 | processed_transcript | ||
| ENST00000544358 |
OGFOD2-021 | 122974861-122978547 | processed_transcript | ||
| ENST00000544852 |
OGFOD2-025 | 122974867-122978868 | processed_transcript | ||
| ENST00000545033 |
OGFOD2-019 | 122975245-122979010 | processed_transcript | ||
| ENST00000545056 |
OGFOD2-004 | 122974748-122979265 | protein_coding | ||
| ENST00000545317 |
OGFOD2-003 | 122974817-122979438 | protein_coding | ||
| ENST00000545396 |
OGFOD2-013 | 122975239-122979439 | retained_intron | ||
| ENST00000545612 |
OGFOD2-010 | 122974752-122979438 | protein_coding | ||
| ENST00000545976 |
OGFOD2-026 | 122976885-122978830 | retained_intron | ||
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00084E | CIL_00084E_0001 | VISTA | 12:122762377-123367178 |
| CIL_00006P | CIL_00006P_0002 | CGP | 12:122865328-122981649 |
| CIL_0002PC | CIL_0002PC_0001 | CGP | 12:122920951-122981649 |
| CIL_0002P6 | CIL_0002P6_0001 | CGP | 12:122974580-122982913 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005506 | IEA | iron ion binding |
| GO:0016705 | IEA | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0016706 | IEA | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors |
| GO:0031418 | IEA | L-ascorbic acid binding |
| GO:0055114 | IEA | oxidation-reduction process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000056211
|
ogfod2 | 2-oxoglutarate and iron-dependent oxygenase domain containing 2 | protein_coding | Danio_rerio | |
|
ENSMUSG00000023707
|
Ogfod2 | 2-oxoglutarate and iron-dependent oxygenase domain containing 2 | protein_coding | Mus_musculus | |
