C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | 2-oxoglutarate and iron-dependent oxygenase domain containing 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000540324  |
OGFOD2-002 |
ENSG00000111325 |
9606 | + |
12:122975252-122980040  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00084E | CIL_00084E_0001 | VISTA | 12:122762377-123367178 |
| CIL_00006P | CIL_00006P_0002 | CGP | 12:122865328-122981649 |
| CIL_0002PC | CIL_0002PC_0001 | CGP | 12:122920951-122981649 |
| CIL_0002P6 | CIL_0002P6_0001 | CGP | 12:122974580-122982913 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005506 | IEA | iron ion binding |
| GO:0016706 | IEA | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors |
| GO:0031418 | IEA | L-ascorbic acid binding |
| GO:0055114 | IEA | oxidation-reduction process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000024470
|
Ogfod2-001 | protein_coding | Mus_musculus | 0 | 651 |
|
ENSMUST00000130140
|
Ogfod2-003 | retained_intron | Mus_musculus | 0 | 505 |
|
ENSMUST00000119269
|
Ogfod2-002 | protein_coding | Mus_musculus | 0 | 442 |
|
ENSMUST00000136955
|
Ogfod2-006 | retained_intron | Mus_musculus | 0 | 412 |
