C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, rho 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000602432 GABRR2-002 ENSG00000111886 9606 - 6:89257208-89269353 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000602432
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000602432 0.047±0.00 0.565±0.00 0.053±0.00 0.152±0.00 0.168±0.06 0.107±0.02 0.253±0.17 0.062±0.03 0.162±0.07 0.176±0.06 0.126±0.00 0.157±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BT CIL_0006BT_0002 CGP 6:89257208-89352848

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024035 Gabrr2-201 protein_coding Mus_musculus 0 1397
ENSMUST00000108162 Gabrr2-001 protein_coding Mus_musculus 0 1397
ENSMUST00000131920 Gabrr2-003 protein_coding Mus_musculus 0 841
ENSMUST00000147889 Gabrr2-002 protein_coding Mus_musculus 0 839
ENSMUST00000029947 Gabrr1-001 protein_coding Mus_musculus 0 776
ENSDART00000011946 GABRR1 (1 of 2)-201 protein_coding Danio_rerio 0 643
ENSDART00000012376 gabrr1-001 protein_coding Danio_rerio 0 632
ENSDART00000152675 gabrr1-002 protein_coding Danio_rerio 0 255

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