C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine incorporator 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000111897 SERINC1 9606 - 6:122443354-122471822 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339697 SERINC1-001 122443354-122471822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000339697
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000339697 83.572±0.00 51.383±0.00 19.395±0.00 155.770±48.11 67.917±32.33 55.951±33.50 27.593±21.21 52.532±21.47 39.364±1.55 66.457±25.40 39.685±23.64 39.265±8.62 64.480±13.56 43.579±4.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OP CIL_0005OP_0001 CGP 6:122399546-122471822
CIL_0005OO CIL_0005OO_0001 CGP 6:122443354-122726373

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005789 ISS endoplasmic reticulum membrane
GO:0005886 ISS plasma membrane
GO:0006658 ISS phosphatidylserine metabolic process
GO:0006665 ISS sphingolipid metabolic process
GO:0008654 IEA phospholipid biosynthetic process
GO:0015194 ISS L-serine transmembrane transporter activity
GO:0015825 ISS L-serine transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0051347 ISS positive regulation of transferase activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009106 serinc1 serine incorporator 1 protein_coding Danio_rerio
ENSMUSG00000019877 Serinc1 serine incorporator 1 protein_coding Mus_musculus

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