C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005OO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111897-ENSG00000135549 CGP 9606 6:122443354-122726373
GeneTranscriptPositionBiotype
ENSG00000111897 (SERINC1)
serine incorporator 1 		ENST00000339697 (SERINC1-001) 122443354-122471822 protein_coding
ENSG00000135549 (PKIB)
protein kinase (cAMP-dependent, catalytic) inhibitor beta 		ENST00000258014 (PKIB-001) 122652732-122726373 protein_coding
ENST00000354275 (PKIB-005) 122717561-122725892 protein_coding
ENST00000368446 (PKIB-003) 122717562-122725281 protein_coding
ENST00000368448 (PKIB-004) 122610232-122725892 protein_coding
ENST00000368452 (PKIB-002) 122610232-122725892 protein_coding
ENST00000392490 (PKIB-201) 122610232-122726372 protein_coding
ENST00000392491 (PKIB-006) 122471931-122725890 protein_coding
ENST00000583007 (PKIB-011) 122482088-122633330 processed_transcript
ENST00000607474 (PKIB-008) 122471934-122493475 processed_transcript
ENST00000608895 (PKIB-009) 122471979-122586124 processed_transcript
ENST00000615438 (PKIB-202) 122471917-122726372 protein_coding
ENST00000618977 (PKIB-010) 122482079-122633330 processed_transcript
ENSG00000272472 (RP11-95G17.2)
 ENST00000606756 (RP11-95G17.2-001) 122643388-122644771 sense_intronic
ENSG00000275339 (RP3-425C14.6)
 ENST00000612510 (RP3-425C14.6-001) 122454358-122454612 processed_pseudogene
ENSG00000279114 (RP3-425C14.5)
 ENST00000624363 (RP3-425C14.5-001) 122471923-122484161 TEC
CIL_0005OO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019877-ENSMUSG00000019876 CGP 10090 10:57515774-57741112
GeneTranscriptPositionBiotype
ENSMUSG00000019876 (Pkib)
protein kinase inhibitor beta, cAMP dependent, testis specific 		ENSMUST00000066028 (Pkib-007) 57650981-57737083 protein_coding
ENSMUST00000075992 (Pkib-002) 57632051-57741112 protein_coding
ENSMUST00000095668 (Pkib-001) 57631981-57738928 protein_coding
ENSMUST00000175852 (Pkib-008) 57650994-57736371 protein_coding
ENSMUST00000176225 (Pkib-004) 57632094-57654740 retained_intron
ENSMUST00000176354 (Pkib-010) 57727981-57736441 processed_transcript
ENSMUST00000176741 (Pkib-005) 57640960-57716906 processed_transcript
ENSMUST00000177299 (Pkib-003) 57632056-57710369 retained_intron
ENSMUST00000177325 (Pkib-006) 57645834-57736370 protein_coding
ENSMUST00000177438 (Pkib-011) 57632124-57728150 protein_coding
ENSMUST00000177473 (Pkib-009) 57645885-57736370 protein_coding
ENSMUSG00000019877 (Serinc1)
serine incorporator 1 		ENSMUST00000020027 (Serinc1-001) 57515774-57532530 protein_coding
ENSMUST00000164400 (Serinc1-005) 57525231-57532409 retained_intron
ENSMUST00000166997 (Serinc1-002) 57525225-57532477 retained_intron
ENSMUST00000169122 (Serinc1-003) 57523035-57532428 protein_coding
ENSMUST00000170062 (Serinc1-004) 57523184-57532410 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005OO_0001ENSG00000111897ENST00000339697ENSG00000135549ENST00000258014ENST00000354275ENST00000368446ENST00000368448ENST00000368452ENST00000392490ENST00000392491ENST00000583007ENST00000607474ENST00000608895ENST00000615438ENST00000618977ENSG00000272472ENST00000606756ENSG00000275339ENST00000612510ENSG00000279114ENST00000624363CIL_0005OO_0002ENSMUSG00000019876ENSMUST00000066028ENSMUST00000075992ENSMUST00000095668ENSMUST00000175852ENSMUST00000176225ENSMUST00000176354ENSMUST00000176741ENSMUST00000177299ENSMUST00000177325ENSMUST00000177438ENSMUST00000177473ENSMUSG00000019877ENSMUST00000020027ENSMUST00000164400ENSMUST00000166997ENSMUST00000169122ENSMUST00000170062
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005OO_0001ENSG00000111897ENST00000339697ENSG00000135549ENST00000258014ENST00000354275ENST00000368446ENST00000368452ENST00000392490ENST00000392491ENST00000607474ENST00000615438ENSG00000272472ENST00000606756ENSG00000275339ENST00000612510ENSG00000279114ENST00000624363CIL_0005OO_0002ENSMUSG00000019876ENSMUST00000066028ENSMUST00000075992ENSMUST00000095668ENSMUST00000176225ENSMUST00000176354ENSMUST00000176741ENSMUST00000177299ENSMUST00000177325ENSMUST00000177438ENSMUST00000177473ENSMUSG00000019877ENSMUST00000020027
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111897 ENST00000339697 83.572±0.00 51.383±0.00 19.395±0.00 155.770±48.11 67.917±32.33 55.951±33.50 27.593±21.21 52.532±21.47 39.364±1.55 66.457±25.40 39.685±23.64 39.265±8.62 64.480±13.56 43.579±4.14
ENSG00000135549 ENST00000258014 N/A 0.091±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.647±1.83 N/A
ENST00000354275 N/A 0.231±0.00 N/A 0.463±0.00 0.972±0.00 2.949±0.00 0.039±0.00 0.796±0.08 0.343±0.03 1.100±0.00 0.033±0.00 0.633±0.00 18.233±0.00 N/A
ENST00000368446 N/A N/A N/A N/A 0.641±0.00 N/A 0.070±0.00 N/A 0.357±0.22 N/A N/A 1.008±0.63 N/A N/A
ENST00000368448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000368452 0.435±0.00 N/A N/A 0.731±0.13 1.438±0.60 9.084±7.99 N/A N/A 0.463±0.00 1.750±0.00 N/A 0.330±0.08 20.139±3.59 0.717±0.03
ENST00000392490 0.073±0.00 N/A N/A 0.700±0.42 N/A 0.440±0.00 0.080±0.00 N/A N/A N/A N/A 0.060±0.01 N/A N/A
ENST00000392491 N/A N/A 0.226±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.624±0.58 N/A N/A
ENST00000583007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607474 N/A N/A N/A N/A N/A N/A N/A 0.481±0.00 N/A N/A N/A N/A N/A N/A
ENST00000608895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.176±0.06
ENST00000618977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272472 ENST00000606756 0.055±0.00 0.033±0.00 N/A 0.147±0.00 0.030±0.00 0.271±0.24 0.030±0.02 N/A 0.037±0.00 0.076±0.00 N/A 0.051±0.01 0.038±0.02 0.063±0.01
ENSG00000275339 ENST00000612510 0.196±0.00 0.426±0.00 N/A 0.526±0.45 N/A 7.847±0.00 0.936±0.00 N/A 4.085±0.00 0.323±0.00 0.069±0.00 0.068±0.00 N/A N/A
ENSG00000279114 ENST00000624363 0.031±0.00 0.086±0.00 0.133±0.00 0.053±0.00 0.088±0.00 N/A 0.023±0.01 0.064±0.00 N/A 0.148±0.00 0.004±0.00 0.051±0.05 N/A 0.053±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019876 ENSMUST00000066028 0.215±0.00 N/A 0.327±0.08 0.584±0.30 0.556±0.00 N/A 0.233±0.07 0.475±0.00 0.486±0.05 0.859±0.00 0.207±0.00 0.276±0.00 0.733±0.18 N/A
ENSMUST00000075992 N/A 0.360±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 N/A N/A N/A
ENSMUST00000095668 0.193±0.08 0.186±0.01 0.118±0.00 0.154±0.00 0.907±0.21 0.195±0.03 0.063±0.00 0.161±0.00 0.095±0.00 0.531±0.03 N/A 0.356±0.17 0.152±0.06 N/A
ENSMUST00000175852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176225 0.733±0.28 0.872±0.34 1.119±0.60 1.012±0.52 0.908±0.42 1.300±0.10 0.441±0.03 0.992±0.16 0.609±0.43 1.108±0.05 0.185±0.02 1.175±0.76 0.888±0.70 N/A
ENSMUST00000176354 N/A N/A N/A 24.725±0.00 N/A N/A N/A N/A N/A N/A N/A 6.142±0.00 8.382±4.64 169.408±0.00
ENSMUST00000176741 N/A 0.150±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177299 N/A 0.534±0.15 N/A N/A 0.401±0.13 0.166±0.00 N/A N/A N/A N/A 0.069±0.00 0.364±0.12 N/A N/A
ENSMUST00000177325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 208.979±84.72
ENSMUST00000177438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.955±0.00 N/A N/A
ENSMUST00000177473 N/A N/A N/A N/A 1.701±0.00 N/A N/A N/A N/A 2.543±0.00 N/A N/A N/A N/A
ENSMUSG00000019877 ENSMUST00000020027 73.947±3.17 16.868±2.55 73.835±0.01 96.008±4.27 47.636±11.61 20.305±9.87 51.834±7.50 50.518±1.92 47.781±6.53 78.005±6.23 46.524±2.33 27.365±21.04 44.522±25.29 10.456±4.24
ENSMUST00000164400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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