C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 24
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112183 RBM24 9606 + 6:17281346-17293875 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000318204 RBM24-002 17282701-17293866 protein_coding
  ENST00000379052 RBM24-001 17281346-17293875 protein_coding
  ENST00000425446 RBM24-008 17282064-17292454 protein_coding
  ENST00000503965 RBM24-009 17282337-17292136 protein_coding
  ENST00000504055 RBM24-007 17283044-17292217 processed_transcript
  ENST00000508508 RBM24-006 17289969-17293023 processed_transcript
  ENST00000509686 RBM24-004 17281705-17293030 protein_coding
  ENST00000510826 RBM24-005 17289855-17292763 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000318204ENST00000379052ENST00000425446ENST00000503965ENST00000508508ENST00000509686ENST00000510826
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000318204 0.130±0.00 0.256±0.00 1.293±0.00 N/A N/A 4.537±0.00 0.252±0.00 N/A N/A N/A N/A 0.080±0.00 N/A
ENST00000379052 0.474±0.00 N/A 0.472±0.00 1.338±0.00 1.005±0.91 7.797±3.47 0.440±0.00 0.024±0.00 0.319±0.00 12.168±0.00 0.705±0.19 0.225±0.00 2.779±1.98
ENST00000425446 N/A 0.154±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503965 N/A N/A N/A N/A N/A N/A 0.647±0.00 N/A N/A N/A N/A N/A N/A
ENST00000508508 N/A 0.135±0.00 0.778±0.00 N/A 1.667±1.14 9.771±0.00 N/A 0.818±0.75 1.343±0.00 27.676±0.00 0.940±0.35 0.027±0.00 N/A
ENST00000509686 0.596±0.00 N/A 1.487±0.00 2.304±0.00 N/A 19.878±0.00 N/A N/A 1.605±0.00 40.090±0.00 0.860±0.00 0.367±0.00 2.923±0.00
ENST00000510826 N/A N/A N/A 0.282±0.00 N/A N/A N/A N/A N/A N/A 1.663±0.00 0.263±0.00 5.572±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RR CIL_0003RR_0001 CGP 6:17102258-17293875
CIL_0009C9 CIL_0009C9_0001 VISTA 6:17172901-17774881
CIL_0008JF CIL_0008JF_0001 VISTA 6:17172919-17774874
CIL_0008B7 CIL_0008B7_0001 VISTA 6:17234961-17839440
CIL_0003RO CIL_0003RO_0001 CGP 6:17281346-17557792

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003730 ISS mRNA 3'-UTR binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0010830 ISS regulation of myotube differentiation
GO:0030154 IEA cell differentiation
GO:0043488 ISS regulation of mRNA stability

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031809 rbm24b RNA binding motif protein 24b protein_coding Danio_rerio
ENSDARG00000078293 rbm24a RNA binding motif protein 24a protein_coding Danio_rerio
ENSDARG00000094270 RBM24 (3 of 3) RNA binding motif protein 24 protein_coding Danio_rerio
ENSMUSG00000038132 Rbm24 RNA binding motif protein 24 protein_coding Mus_musculus

Loading