C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003RO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112183-ENSG00000112186 CGP 9606 6:17281346-17557792
GeneTranscriptPositionBiotype
ENSG00000112183 (RBM24)
RNA binding motif protein 24 		ENST00000318204 (RBM24-002) 17282701-17293866 protein_coding
ENST00000379052 (RBM24-001) 17281346-17293875 protein_coding
ENST00000425446 (RBM24-008) 17282064-17292454 protein_coding
ENST00000503965 (RBM24-009) 17282337-17292136 protein_coding
ENST00000504055 (RBM24-007) 17283044-17292217 processed_transcript
ENST00000508508 (RBM24-006) 17289969-17293023 processed_transcript
ENST00000509686 (RBM24-004) 17281705-17293030 protein_coding
ENST00000510826 (RBM24-005) 17289855-17292763 processed_transcript
ENSG00000112186 (CAP2)
CAP, adenylate cyclase-associated protein, 2 (yeast) 		ENST00000229922 (CAP2-001) 17393216-17557792 protein_coding
ENST00000378990 (CAP2-006) 17393645-17556795 protein_coding
ENST00000465994 (CAP2-007) 17393712-17556568 protein_coding
ENST00000476263 (CAP2-008) 17393732-17539290 nonsense_mediated_decay
ENST00000479291 (CAP2-005) 17393712-17551570 nonsense_mediated_decay
ENST00000489374 (CAP2-003) 17393633-17556659 protein_coding
ENST00000493172 (CAP2-004) 17393663-17556564 protein_coding
ENST00000611958 (CAP2-201) 17393595-17557790 protein_coding
ENST00000616440 (CAP2-202) 17393505-17557790 protein_coding
ENSG00000184612 (RPL7P26)
ribosomal protein L7 pseudogene 26 		ENST00000333817 (RPL7P26-001) 17530899-17531652 processed_pseudogene
ENSG00000219314 (RP1-273P12.1)
 ENST00000407586 (RP1-273P12.1-001) 17381367-17382120 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0003RO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038132-ENSMUSG00000021373 CGP 10090 13:46418300-46649642
GeneTranscriptPositionBiotype
ENSMUSG00000021373 (Cap2)
CAP, adenylate cyclase-associated protein, 2 (yeast) 		ENSMUST00000021802 (Cap2-001) 46501848-46649642 protein_coding
ENSMUST00000119341 (Cap2-002) 46502125-46649635 protein_coding
ENSMUST00000126687 (Cap2-003) 46640058-46646572 processed_transcript
ENSMUSG00000038132 (Rbm24)
RNA binding motif protein 24 		ENSMUST00000037923 (Rbm24-201) 46418300-46431090 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RO_0001ENSG00000112183ENST00000318204ENST00000379052ENST00000425446ENST00000503965ENST00000504055ENST00000508508ENST00000509686ENST00000510826ENSG00000112186ENST00000229922ENST00000378990ENST00000465994ENST00000476263ENST00000479291ENST00000489374ENST00000493172ENST00000611958ENST00000616440ENSG00000184612ENST00000333817ENSG00000219314ENST00000407586CIL_0003RO_0002ENSMUSG00000021373ENSMUST00000021802ENSMUST00000119341ENSMUST00000126687ENSMUSG00000038132ENSMUST00000037923
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RO_0001ENSG00000112183ENST00000318204ENST00000379052ENST00000425446ENST00000503965ENST00000508508ENST00000509686ENST00000510826ENSG00000112186ENST00000229922ENST00000378990ENST00000465994ENST00000476263ENST00000489374ENST00000493172ENST00000611958ENST00000616440ENSG00000184612ENST00000333817ENSG00000219314ENST00000407586CIL_0003RO_0002ENSMUSG00000021373ENSMUST00000021802ENSMUST00000119341ENSMUSG00000038132ENSMUST00000037923
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112183 ENST00000318204 0.130±0.00 N/A 0.256±0.00 1.293±0.00 N/A N/A 4.537±0.00 0.252±0.00 N/A N/A N/A N/A 0.080±0.00 N/A
ENST00000379052 0.474±0.00 N/A N/A 0.472±0.00 1.338±0.00 1.005±0.91 7.797±3.47 0.440±0.00 0.024±0.00 0.319±0.00 12.168±0.00 0.705±0.19 0.225±0.00 2.779±1.98
ENST00000425446 N/A N/A 0.154±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503965 N/A N/A N/A N/A N/A N/A N/A 0.647±0.00 N/A N/A N/A N/A N/A N/A
ENST00000504055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508508 N/A N/A 0.135±0.00 0.778±0.00 N/A 1.667±1.14 9.771±0.00 N/A 0.818±0.75 1.343±0.00 27.676±0.00 0.940±0.35 0.027±0.00 N/A
ENST00000509686 0.596±0.00 N/A N/A 1.487±0.00 2.304±0.00 N/A 19.878±0.00 N/A N/A 1.605±0.00 40.090±0.00 0.860±0.00 0.367±0.00 2.923±0.00
ENST00000510826 N/A N/A N/A N/A 0.282±0.00 N/A N/A N/A N/A N/A N/A 1.663±0.00 0.263±0.00 5.572±0.00
ENSG00000112186 ENST00000229922 0.365±0.00 N/A N/A 18.701±0.00 3.959±2.74 0.907±0.00 4.762±0.73 1.888±0.00 1.727±1.65 0.655±0.00 25.410±8.92 2.575±0.00 2.705±0.61 0.630±0.42
ENST00000378990 0.257±0.00 3.391±0.00 N/A 29.931±0.00 3.142±2.81 12.464±0.00 14.123±0.00 N/A N/A N/A 91.042±0.00 1.017±0.73 0.886±0.00 2.738±2.53
ENST00000465994 0.704±0.00 N/A N/A 19.854±0.00 0.835±0.00 0.643±0.00 4.389±0.00 0.098±0.00 4.344±0.00 0.221±0.00 25.741±0.00 1.029±0.00 1.529±0.00 0.596±0.00
ENST00000476263 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00 N/A N/A N/A N/A
ENST00000479291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489374 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.135±0.00 N/A 0.971±0.00 N/A N/A
ENST00000493172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.374±0.00 1.609±0.00 N/A
ENST00000611958 0.295±0.00 2.438±0.00 0.392±0.00 27.471±0.00 6.899±0.00 12.238±0.00 14.950±0.00 1.801±1.50 0.508±0.00 1.542±0.00 112.204±0.00 2.282±0.00 1.575±0.03 4.154±0.00
ENST00000616440 N/A 0.676±0.00 N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A N/A 0.150±0.00 N/A N/A
ENSG00000184612 ENST00000333817 0.065±0.00 0.139±0.00 N/A 0.190±0.00 0.170±0.00 0.100±0.00 0.087±0.07 0.104±0.00 0.786±0.00 N/A 0.485±0.09 0.231±0.11 0.094±0.00 N/A
ENSG00000219314 ENST00000407586 N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021373 ENSMUST00000021802 7.161±5.99 0.653±0.24 44.505±3.56 6.658±5.45 4.664±4.38 3.629±0.87 27.840±3.14 0.671±0.23 0.325±0.19 4.083±1.44 61.239±6.70 5.800±2.49 0.684±0.75 6.675±0.84
ENSMUST00000119341 N/A N/A N/A 37.042±0.00 N/A N/A N/A N/A 0.024±0.00 N/A N/A 2.481±0.00 0.200±0.10 4.692±0.00
ENSMUST00000126687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038132 ENSMUST00000037923 7.803±7.85 5.271±0.42 13.989±1.10 2.121±0.84 6.011±6.48 1.772±0.55 55.009±7.92 0.495±0.02 0.040±0.04 3.169±0.91 50.869±4.86 5.965±3.98 0.068±0.09 0.193±0.08

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