C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: iroquois homeobox 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113430 IRX4 9606 - 5:1877413-1887236 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000231357 IRX4-001 1877427-1882766 protein_coding
  ENST00000505790 IRX4-004 1877448-1887218 protein_coding
  ENST00000505938 IRX4-006 1878785-1881093 processed_transcript
  ENST00000508261 IRX4-002 1877814-1882752 nonsense_mediated_decay
  ENST00000511126 IRX4-005 1879670-1882744 protein_coding
  ENST00000513692 IRX4-003 1877413-1887236 protein_coding
  ENST00000613726 IRX4-201 1877427-1886984 protein_coding
  ENST00000622814 IRX4-202 1877427-1887179 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLungMuscleOvaryPlacentaTestisENST00000231357ENST00000505790ENST00000505938ENST00000508261ENST00000511126ENST00000513692ENST00000613726ENST00000622814
Transcript ID Adipose Adrenal Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000231357 N/A 0.055±0.00 0.154±0.12 0.566±0.00 N/A N/A N/A 0.226±0.00 N/A 0.126±0.00
ENST00000505790 N/A N/A N/A 1.805±0.00 0.042±0.00 N/A N/A N/A N/A 0.164±0.00
ENST00000505938 N/A N/A N/A 0.419±0.00 N/A 0.076±0.00 N/A 0.296±0.21 0.293±0.00 N/A
ENST00000508261 0.046±0.00 N/A N/A N/A N/A N/A N/A 0.091±0.00 0.088±0.00 N/A
ENST00000511126 0.062±0.00 N/A N/A 0.367±0.00 N/A N/A N/A N/A N/A N/A
ENST00000513692 N/A N/A N/A 1.412±0.00 N/A N/A 0.724±0.00 N/A N/A N/A
ENST00000613726 N/A N/A N/A N/A N/A N/A N/A 0.545±0.00 N/A N/A
ENST00000622814 N/A N/A N/A 0.827±0.00 N/A N/A N/A 0.584±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q6 CIL_0008Q6_0001 VISTA 5:1540437-2141987
CIL_0007SF CIL_0007SF_0001 VISTA 5:1811941-2413316

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007507 IEA heart development
GO:0043565 IEA sequence-specific DNA binding
GO:0048561 IEA establishment of organ orientation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035648 irx4a iroquois homeobox protein 4a protein_coding Danio_rerio
ENSMUSG00000021604 Irx4 Iroquois related homeobox 4 (Drosophila) protein_coding Mus_musculus

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