C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Iroquois related homeobox 4 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021604 Irx4 10090 + 13:73260479-73269608 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022095 Irx4-001 73260497-73269608 protein_coding
  ENSMUST00000176684 Irx4-002 73260479-73269608 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000022095ENSMUST00000176684
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000022095 N/A 0.511±0.32 0.750±0.21 N/A 2.806±1.23 0.094±0.01 0.011±0.00 N/A N/A 0.113±0.00
ENSMUST00000176684 0.042±0.02 0.448±0.38 0.947±0.55 0.240±0.09 3.462±1.20 0.081±0.02 0.005±0.00 0.028±0.00 0.038±0.02 3.201±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00092V CIL_00092V_0002 VISTA 13:72733138-73336182
CIL_0007SF CIL_0007SF_0002 VISTA 13:72816617-73418032
CIL_0008Q6 CIL_0008Q6_0002 VISTA 13:72998274-73600313

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005667 ISS transcription factor complex
GO:0006357 ISS regulation of transcription from RNA polymerase II promoter
GO:0007507 IMP heart development
GO:0030154 IEA cell differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0048561 IEA establishment of organ orientation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035648 irx4a iroquois homeobox protein 4a protein_coding Danio_rerio
ENSG00000113430 IRX4 iroquois homeobox 4 protein_coding Homo_sapiens

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