C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glucosamine-6-phosphate deaminase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113552 GNPDA1 9606 - 5:141991749-142013041 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000311337 GNPDA1-001 142000669-142013031 protein_coding
  ENST00000500692 GNPDA1-002 142000674-142013030 protein_coding
  ENST00000503229 GNPDA1-007 142005112-142013027 protein_coding
  ENST00000503794 GNPDA1-004 142000678-142012973 protein_coding
  ENST00000504139 GNPDA1-014 142002086-142013031 protein_coding
  ENST00000504424 GNPDA1-008 142011949-142012996 protein_coding
  ENST00000505689 GNPDA1-012 142002090-142013041 protein_coding
  ENST00000507107 GNPDA1-009 142006036-142013027 retained_intron
  ENST00000507559 GNPDA1-010 142004875-142006314 retained_intron
  ENST00000508177 GNPDA1-003 142000678-142012794 protein_coding
  ENST00000510194 GNPDA1-006 142005044-142012996 protein_coding
  ENST00000513454 GNPDA1-013 141991749-142013027 protein_coding
  ENST00000515747 GNPDA1-011 142003218-142005441 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000311337ENST00000500692ENST00000504139ENST00000507107ENST00000508177
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000311337 8.427±0.00 7.335±0.00 2.385±0.00 5.731±3.01 4.322±2.99 5.999±4.13 3.596±2.25 19.781±0.00 1.960±0.25 6.854±0.00 10.510±0.00 14.811±7.59 12.777±3.59 10.503±4.83
ENST00000500692 N/A N/A N/A N/A N/A 1.873±0.00 N/A 5.880±0.00 N/A 1.662±0.00 N/A N/A N/A N/A
ENST00000504139 N/A N/A N/A N/A 2.714±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507107 N/A N/A 2.224±0.00 N/A N/A N/A N/A N/A 2.637±0.00 N/A 4.704±0.00 N/A N/A N/A
ENST00000508177 N/A N/A N/A N/A N/A N/A N/A N/A 1.186±0.00 0.684±0.00 0.826±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Q5 CIL_0006Q5_0001 CGP 5:141958328-142013041
CIL_00062Z CIL_00062Z_0002 CGP 5:141991749-142154443

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004342 IEA:IMP glucosamine-6-phosphate deaminase activity
GO:0005737 ISS cytoplasm
GO:0005975 IEA carbohydrate metabolic process
GO:0006043 IMP glucosamine catabolic process
GO:0006044 IEA N-acetylglucosamine metabolic process
GO:0006091 IMP generation of precursor metabolites and energy
GO:0007338 TAS single fertilization
GO:0016787 IEA hydrolase activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037307 gnpda1 glucosamine-6-phosphate deaminase 1 protein_coding Danio_rerio
ENSMUSG00000052102 Gnpda1 glucosamine-6-phosphate deaminase 1 protein_coding Mus_musculus

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