C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00062Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000037307-ENSDARG00000013979 CGP 7955 14:24613443-24630999
GeneTranscriptPositionBiotype
ENSDARG00000013979 (ndfip1)
Nedd4 family interacting protein 1 		ENSDART00000006373 (ndfip1-001) 24621396-24630999 protein_coding
ENSDART00000126401 (ndfip1-201) 24621608-24630997 protein_coding
ENSDARG00000037307 (gnpda1)
glucosamine-6-phosphate deaminase 1 		ENSDART00000054266 (gnpda1-001) 24613443-24617934 protein_coding
ENSDART00000131287 (gnpda1-003) 24613873-24614819 retained_intron
ENSDART00000136909 (gnpda1-002) 24613774-24617722 protein_coding
CIL_00062Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000113552-ENSG00000131507 CGP 9606 5:141991749-142154443
GeneTranscriptPositionBiotype
ENSG00000113552 (GNPDA1)
glucosamine-6-phosphate deaminase 1 		ENST00000311337 (GNPDA1-001) 142000669-142013031 protein_coding
ENST00000500692 (GNPDA1-002) 142000674-142013030 protein_coding
ENST00000503229 (GNPDA1-007) 142005112-142013027 protein_coding
ENST00000503794 (GNPDA1-004) 142000678-142012973 protein_coding
ENST00000504139 (GNPDA1-014) 142002086-142013031 protein_coding
ENST00000504424 (GNPDA1-008) 142011949-142012996 protein_coding
ENST00000505689 (GNPDA1-012) 142002090-142013041 protein_coding
ENST00000507107 (GNPDA1-009) 142006036-142013027 retained_intron
ENST00000507559 (GNPDA1-010) 142004875-142006314 retained_intron
ENST00000508177 (GNPDA1-003) 142000678-142012794 protein_coding
ENST00000510194 (GNPDA1-006) 142005044-142012996 protein_coding
ENST00000513454 (GNPDA1-013) 141991749-142013027 protein_coding
ENST00000515747 (GNPDA1-011) 142003218-142005441 retained_intron
ENSG00000131507 (NDFIP1)
Nedd4 family interacting protein 1 		ENST00000253814 (NDFIP1-001) 142108505-142154443 protein_coding
ENST00000503388 (NDFIP1-002) 142142978-142154195 retained_intron
ENST00000505614 (NDFIP1-004) 142135730-142138192 retained_intron
ENST00000509436 (NDFIP1-003) 142108788-142134068 processed_transcript
ENSG00000250347 (AC005740.4)
 ENST00000511085 (AC005740.4-001) 142036707-142037125 processed_pseudogene
CIL_00062Z_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052102-ENSMUSG00000024425 CGP 10090 18:38327558-38464399
GeneTranscriptPositionBiotype
ENSMUSG00000024425 (Ndfip1)
Nedd4 family interacting protein 1 		ENSMUST00000025293 (Ndfip1-201) 38418975-38464399 protein_coding
ENSMUSG00000052102 (Gnpda1)
glucosamine-6-phosphate deaminase 1 		ENSMUST00000063814 (Gnpda1-001) 38327558-38339003 protein_coding
ENSMUST00000129062 (Gnpda1-004) 38333097-38335078 retained_intron
ENSMUST00000139885 (Gnpda1-002) 38333189-38338909 protein_coding
ENSMUST00000153291 (Gnpda1-003) 38328683-38332070 processed_transcript
ENSMUSG00000088384 (Gm24690)
predicted gene, 24690 		ENSMUST00000157759 (Gm24690-201) 38356578-38356674 rRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062Z_0001ENSDARG00000013979ENSDART00000006373ENSDART00000126401ENSDARG00000037307ENSDART00000054266ENSDART00000131287ENSDART00000136909CIL_00062Z_0002ENSG00000113552ENST00000311337ENST00000500692ENST00000503229ENST00000503794ENST00000504139ENST00000504424ENST00000505689ENST00000507107ENST00000507559ENST00000508177ENST00000510194ENST00000513454ENST00000515747ENSG00000131507ENST00000253814ENST00000503388ENST00000505614ENST00000509436ENSG00000250347ENST00000511085CIL_00062Z_0003ENSMUSG00000024425ENSMUST00000025293ENSMUSG00000052102ENSMUST00000063814ENSMUST00000129062ENSMUST00000139885ENSMUST00000153291ENSMUSG00000088384ENSMUST00000157759
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062Z_0001ENSDARG00000013979ENSDART00000006373ENSDART00000126401ENSDARG00000037307ENSDART00000054266ENSDART00000131287ENSDART00000136909CIL_00062Z_0002ENSG00000113552ENST00000311337ENST00000500692ENST00000504139ENST00000507107ENST00000508177ENSG00000131507ENST00000253814ENST00000503388ENSG00000250347ENST00000511085CIL_00062Z_0003ENSMUSG00000024425ENSMUST00000025293ENSMUSG00000052102ENSMUST00000063814ENSMUST00000153291ENSMUSG00000088384ENSMUST00000157759
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013979 ENSDART00000006373 N/A N/A N/A 59.458±12.19 N/A N/A 34.719±16.19 15.035±8.65 4.613±0.00 N/A 12.270±0.00 N/A N/A N/A
ENSDART00000126401 N/A N/A N/A 74.907±27.67 N/A N/A 50.806±26.86 48.303±11.96 1.521±0.00 N/A 20.989±0.00 N/A N/A N/A
ENSDARG00000037307 ENSDART00000054266 N/A N/A N/A 1.231±0.46 N/A N/A 4.093±1.50 15.639±9.48 N/A N/A 0.886±0.00 N/A N/A N/A
ENSDART00000131287 N/A N/A N/A 0.184±0.00 N/A N/A 0.754±0.22 8.367±0.00 0.261±0.00 N/A 0.315±0.00 N/A N/A N/A
ENSDART00000136909 N/A N/A N/A 0.277±0.00 N/A N/A N/A N/A 0.117±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113552 ENST00000311337 8.427±0.00 7.335±0.00 2.385±0.00 5.731±3.01 4.322±2.99 5.999±4.13 3.596±2.25 19.781±0.00 1.960±0.25 6.854±0.00 10.510±0.00 14.811±7.59 12.777±3.59 10.503±4.83
ENST00000500692 N/A N/A N/A N/A N/A 1.873±0.00 N/A 5.880±0.00 N/A 1.662±0.00 N/A N/A N/A N/A
ENST00000503229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504139 N/A N/A N/A N/A 2.714±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507107 N/A N/A 2.224±0.00 N/A N/A N/A N/A N/A 2.637±0.00 N/A 4.704±0.00 N/A N/A N/A
ENST00000507559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508177 N/A N/A N/A N/A N/A N/A N/A N/A 1.186±0.00 0.684±0.00 0.826±0.00 N/A N/A N/A
ENST00000510194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000131507 ENST00000253814 21.814±0.00 14.333±0.00 6.804±0.00 73.206±8.94 17.303±7.20 13.588±4.68 12.190±4.76 30.045±7.98 18.653±3.40 18.774±3.68 7.090±3.41 20.097±8.33 25.905±1.35 24.992±4.42
ENST00000503388 N/A N/A 0.818±0.00 N/A 1.319±0.00 N/A N/A N/A N/A N/A 0.597±0.00 1.338±0.00 N/A N/A
ENST00000505614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250347 ENST00000511085 N/A N/A N/A 0.056±0.00 0.162±0.00 N/A N/A N/A N/A N/A 0.089±0.00 N/A 0.141±0.00 0.090±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024425 ENSMUST00000025293 82.465±5.36 646.331±106.66 38.723±8.58 110.691±5.38 81.019±39.26 74.224±35.21 26.649±2.73 76.284±24.64 71.287±53.46 43.051±18.85 13.934±3.00 201.722±108.29 43.874±11.58 50.800±18.16
ENSMUSG00000052102 ENSMUST00000063814 9.355±2.39 18.851±7.35 7.218±0.93 3.787±2.07 6.732±1.32 10.399±3.32 5.282±1.66 72.428±5.09 14.381±4.33 5.980±0.79 3.564±0.56 15.066±3.74 33.137±30.29 13.514±6.78
ENSMUST00000129062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.930±0.00 26.138±3.08 N/A
ENSMUSG00000088384 ENSMUST00000157759 N/A N/A N/A 30.631±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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