C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glucosamine-6-phosphate deaminase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052102 Gnpda1 10090 - 18:38327558-38339003 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063814 Gnpda1-001 38327558-38339003 protein_coding
  ENSMUST00000129062 Gnpda1-004 38333097-38335078 retained_intron
  ENSMUST00000139885 Gnpda1-002 38333189-38338909 protein_coding
  ENSMUST00000153291 Gnpda1-003 38328683-38332070 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063814ENSMUST00000153291
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063814 9.355±2.39 18.851±7.35 7.218±0.93 3.787±2.07 6.732±1.32 10.399±3.32 5.282±1.66 72.428±5.09 14.381±4.33 5.980±0.79 3.564±0.56 15.066±3.74 33.137±30.29 13.514±6.78
ENSMUST00000153291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.930±0.00 26.138±3.08 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Q5 CIL_0006Q5_0002 CGP 18:38296635-38339003
CIL_00062Z CIL_00062Z_0003 CGP 18:38327558-38464399

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004342 ISS glucosamine-6-phosphate deaminase activity
GO:0005737 IDA cytoplasm
GO:0006002 ISA fructose 6-phosphate metabolic process
GO:0006041 ISA glucosamine metabolic process
GO:0006043 ISS glucosamine catabolic process
GO:0006044 IEA N-acetylglucosamine metabolic process
GO:0006091 ISS generation of precursor metabolites and energy
GO:0007340 TAS acrosome reaction
GO:0016787 IEA hydrolase activity
GO:0046370 ISA fructose biosynthetic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037307 gnpda1 glucosamine-6-phosphate deaminase 1 protein_coding Danio_rerio
ENSG00000113552 GNPDA1 glucosamine-6-phosphate deaminase 1 protein_coding Homo_sapiens

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