C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation elongation factor 1 beta 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000114942 EEF1B2 9606 + 2:206159585-206162928 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000236957 EEF1B2-001 206159585-206162928 protein_coding
  ENST00000392221 EEF1B2-201 206159594-206162927 protein_coding
  ENST00000392222 EEF1B2-003 206159605-206162928 protein_coding
  ENST00000415904 EEF1B2-005 206159927-206161467 nonsense_mediated_decay
  ENST00000429769 EEF1B2-007 206159636-206162801 nonsense_mediated_decay
  ENST00000435123 EEF1B2-009 206159934-206161454 nonsense_mediated_decay
  ENST00000445505 EEF1B2-004 206159607-206162077 protein_coding
  ENST00000455150 EEF1B2-010 206159934-206162839 nonsense_mediated_decay
  ENST00000460760 EEF1B2-008 206159638-206161190 retained_intron
  ENST00000479587 EEF1B2-006 206159615-206161117 retained_intron
  ENST00000482103 EEF1B2-002 206162228-206162928 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000236957ENST00000392221ENST00000445505ENST00000455150
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000236957 N/A 73.819±0.00 N/A N/A 26.011±0.00 N/A N/A N/A N/A N/A 279.631±260.07 256.875±166.06 15.560±0.00
ENST00000392221 94.114±0.00 145.340±0.00 33.368±0.00 79.972±18.04 73.099±0.14 153.265±50.43 82.920±4.98 109.612±17.57 102.018±30.66 104.663±8.55 120.521±7.68 30.163±0.00 107.477±0.00
ENST00000445505 N/A N/A N/A N/A N/A N/A N/A N/A 227.643±0.00 N/A N/A N/A N/A
ENST00000455150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 212.811±0.00 90.623±0.00 42.217±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039O CIL_00039O_0001 CGP 2:205993721-206159603
CIL_0001R4 CIL_0001R4_0001 CGP 2:206114817-206162928
CIL_0001R5 CIL_0001R5_0001 CGP 2:206159585-206218047

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003746 IEA:NAS translation elongation factor activity
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0005853 IEA:NAS eukaryotic translation elongation factor 1 complex
GO:0006412 TAS translation
GO:0006414 IEA:NAS translational elongation
GO:0010467 TAS gene expression
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044521 eef1b2 eukaryotic translation elongation factor 1 beta 2 protein_coding Danio_rerio
ENSMUSG00000025967 Eef1b2 eukaryotic translation elongation factor 1 beta 2 protein_coding Mus_musculus

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