C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation elongation factor 1 beta 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025967 Eef1b2 10090 + 1:63176825-63180486 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027108 Eef1b2-006 63177145-63179622 nonsense_mediated_decay
  ENSMUST00000126469 Eef1b2-007 63177147-63178423 processed_transcript
  ENSMUST00000126795 Eef1b2-003 63177223-63178898 nonsense_mediated_decay
  ENSMUST00000129339 Eef1b2-001 63176825-63180486 protein_coding
  ENSMUST00000135877 Eef1b2-004 63177145-63179568 nonsense_mediated_decay
  ENSMUST00000142062 Eef1b2-002 63177129-63179362 nonsense_mediated_decay
  ENSMUST00000148553 Eef1b2-005 63177131-63178509 processed_transcript
  ENSMUST00000174890 Eef1b2-008 63177185-63178879 nonsense_mediated_decay
  ENSMUST00000188524 Eef1b2-009 63177130-63179656 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000126469ENSMUST00000129339ENSMUST00000135877ENSMUST00000142062ENSMUST00000188524
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000126469 163.320±12.14 224.056±50.33 N/A N/A 267.560±91.21 390.520±42.44 102.201±6.22 103.888±4.06 116.036±58.99 N/A 250.300±112.06 N/A N/A
ENSMUST00000129339 N/A 32.863±4.80 N/A 42.869±12.59 N/A N/A 30.095±0.00 28.039±19.39 N/A N/A N/A N/A 13.183±2.27
ENSMUST00000135877 137.157±47.96 N/A 355.411±8.39 162.977±0.00 122.583±9.92 115.782±0.00 N/A 327.074±102.10 71.247±10.70 120.582±0.00 251.426±88.32 311.251±51.27 N/A
ENSMUST00000142062 N/A N/A N/A 262.403±0.00 N/A N/A N/A N/A N/A N/A 968.971±0.00 784.333±260.17 213.556±0.00
ENSMUST00000188524 N/A N/A 231.775±12.51 122.804±0.00 N/A N/A N/A 200.012±45.17 N/A N/A 454.803±36.99 401.669±155.92 68.254±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039O CIL_00039O_0002 CGP 1:62958418-63176833
CIL_0001R4 CIL_0001R4_0002 CGP 1:63143596-63180486
CIL_0001R5 CIL_0001R5_0002 CGP 1:63176825-63214543

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003746 ISS translation elongation factor activity
GO:0005515 IPI protein binding
GO:0005853 ISS eukaryotic translation elongation factor 1 complex
GO:0006414 ISS translational elongation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044521 eef1b2 eukaryotic translation elongation factor 1 beta 2 protein_coding Danio_rerio
ENSG00000114942 EEF1B2 eukaryotic translation elongation factor 1 beta 2 protein_coding Homo_sapiens

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