C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ARP1 actin-related protein 1 homolog B, centractin beta (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115073 ACTR1B 9606 - 2:97655963-97664107 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000289228 ACTR1B-001 97655963-97664107 protein_coding
  ENST00000451664 ACTR1B-002 97657978-97663916 retained_intron
  ENST00000460427 ACTR1B-003 97658814-97659891 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000289228ENST00000451664
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000289228 21.014±0.00 23.630±0.00 1.501±0.00 29.369±18.07 12.212±11.20 13.549±11.20 11.847±10.15 16.934±12.21 10.379±6.59 6.695±5.47 16.367±9.67 23.418±11.60 17.929±6.24 15.573±8.85
ENST00000451664 N/A N/A N/A N/A 2.641±0.00 1.285±0.00 0.997±0.00 1.597±0.00 N/A N/A 2.760±0.00 27.360±24.12 18.327±0.00 15.521±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002U7 CIL_0002U7_0001 CGP 2:97646040-97664107
CIL_0002U8 CIL_0002U8_0001 CGP 2:97655963-97739862

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0005869 TAS dynactin complex
GO:0016020 IDA membrane
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011611 actr1 ARP1 actin-related protein 1, centractin (yeast) protein_coding Danio_rerio
ENSMUSG00000037351 Actr1b ARP1 actin-related protein 1B, centractin beta protein_coding Mus_musculus

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