C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ARP1 actin-related protein 1B, centractin beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037351 Actr1b 10090 - 1:36698116-36714422 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043951 Actr1b-001 36698116-36710008 protein_coding
  ENSMUST00000159448 Actr1b-002 36701763-36709678 protein_coding
  ENSMUST00000159675 Actr1b-005 36701213-36701651 retained_intron
  ENSMUST00000160043 Actr1b-006 36702482-36707167 retained_intron
  ENSMUST00000160084 Actr1b-007 36701784-36714422 protein_coding
  ENSMUST00000162662 Actr1b-003 36706548-36709919 processed_transcript
  ENSMUST00000162684 Actr1b-008 36701672-36709947 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043951ENSMUST00000159448
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043951 43.090±1.87 85.892±1.03 42.962±4.81 54.071±12.84 40.503±15.29 94.916±5.23 32.816±2.63 57.673±4.73 25.665±6.95 49.522±3.50 39.335±2.32 53.793±25.09 25.432±5.24 12.829±5.83
ENSMUST00000159448 N/A N/A N/A N/A 20.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002U7 CIL_0002U7_0002 CGP 1:36691487-36714422
CIL_0002U8 CIL_0002U8_0002 CGP 1:36698116-36782816

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011611 actr1 ARP1 actin-related protein 1, centractin (yeast) protein_coding Danio_rerio
ENSG00000115073 ACTR1B ARP1 actin-related protein 1 homolog B, centractin beta (yeast) protein_coding Homo_sapiens

Loading