C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002U8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115073-ENSG00000115085 CGP 9606 2:97655963-97739862
GeneTranscriptPositionBiotype
ENSG00000115073 (ACTR1B)
ARP1 actin-related protein 1 homolog B, centractin beta (yeast) 		ENST00000289228 (ACTR1B-001) 97655963-97664107 protein_coding
ENST00000451664 (ACTR1B-002) 97657978-97663916 retained_intron
ENST00000460427 (ACTR1B-003) 97658814-97659891 retained_intron
ENSG00000115085 (ZAP70)
zeta-chain (TCR) associated protein kinase 70kDa 		ENST00000264972 (ZAP70-001) 97713560-97739860 protein_coding
ENST00000451498 (ZAP70-008) 97734406-97739498 protein_coding
ENST00000463643 (ZAP70-004) 97724461-97739862 processed_transcript
ENST00000483781 (ZAP70-002) 97713582-97733782 retained_intron
ENST00000487283 (ZAP70-003) 97732929-97739859 retained_intron
ENST00000489250 (ZAP70-007) 97737822-97738577 retained_intron
ENST00000495754 (ZAP70-006) 97735230-97738011 retained_intron
ENST00000498836 (ZAP70-005) 97732702-97733424 retained_intron
ENSG00000201806 (RNU4-8P)
RNA, U4 small nuclear 8, pseudogene 		ENST00000364936 (RNU4-8P-201) 97664591-97664731 snRNA
ENSG00000228486 (LINC01125)
long intergenic non-protein coding RNA 1125 		ENST00000428157 (LINC01125-002) 97669743-97671788 antisense
ENST00000445382 (LINC01125-005) 97675821-97703024 antisense
ENST00000450072 (LINC01125-004) 97664217-97675721 antisense
ENST00000451384 (LINC01125-001) 97669746-97703056 antisense
ENST00000458149 (LINC01125-003) 97669776-97702704 antisense
ENST00000594273 (LINC01125-019) 97674328-97694578 antisense
ENST00000595492 (LINC01125-027) 97669793-97702815 antisense
ENST00000595588 (LINC01125-022) 97669793-97702818 antisense
ENST00000596069 (LINC01125-026) 97669793-97702725 antisense
ENST00000596356 (LINC01125-008) 97669799-97677755 antisense
ENST00000596529 (LINC01125-012) 97669793-97688993 antisense
ENST00000596740 (LINC01125-018) 97694456-97703040 antisense
ENST00000597654 (LINC01125-024) 97669793-97703054 antisense
ENST00000597941 (LINC01125-013) 97669793-97688940 antisense
ENST00000598144 (LINC01125-011) 97669793-97699114 antisense
ENST00000598737 (LINC01125-023) 97669793-97703060 antisense
ENST00000598824 (LINC01125-015) 97669793-97701297 antisense
ENST00000599015 (LINC01125-010) 97669793-97699136 antisense
ENST00000599435 (LINC01125-025) 97669793-97702961 antisense
ENST00000599501 (LINC01125-014) 97669793-97702774 antisense
ENST00000599666 (LINC01125-017) 97690992-97701175 antisense
ENST00000599959 (LINC01125-020) 97671375-97699132 antisense
ENST00000600331 (LINC01125-009) 97669793-97701211 antisense
ENST00000600606 (LINC01125-006) 97669800-97702830 antisense
ENST00000601127 (LINC01125-028) 97669713-97671729 antisense
ENST00000601499 (LINC01125-007) 97669793-97701211 antisense
ENST00000601509 (LINC01125-021) 97669793-97703064 antisense
ENST00000601580 (LINC01125-016) 97669793-97701304 antisense
ENST00000603172 (LINC01125-033) 97664239-97671560 antisense
ENST00000603835 (LINC01125-035) 97688925-97702915 antisense
ENST00000604793 (LINC01125-029) 97664239-97671382 antisense
ENST00000604986 (LINC01125-034) 97664247-97671374 antisense
ENST00000605017 (LINC01125-031) 97665803-97671363 antisense
ENST00000605282 (LINC01125-032) 97664239-97671512 antisense
ENST00000605331 (LINC01125-036) 97694532-97702861 antisense
ENST00000605866 (LINC01125-030) 97664247-97671729 antisense
ENST00000608777 (LINC01125-041) 97668648-97671702 antisense
ENST00000609004 (LINC01125-042) 97669180-97671706 antisense
ENST00000609295 (LINC01125-043) 97666957-97671706 antisense
ENST00000609418 (LINC01125-037) 97670183-97671729 antisense
ENST00000609604 (LINC01125-038) 97664261-97671729 antisense
ENST00000609622 (LINC01125-039) 97664261-97671706 antisense
ENST00000609703 (LINC01125-040) 97664272-97671706 antisense
ENST00000615201 (LINC01125-045) 97674203-97675928 antisense
ENST00000615478 (LINC01125-044) 97669686-97671729 antisense
CIL_0002U8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037351-ENSMUSG00000026117 CGP 10090 1:36698116-36782816
GeneTranscriptPositionBiotype
ENSMUSG00000026117 (Zap70)
zeta-chain (TCR) associated protein kinase 		ENSMUST00000027291 (Zap70-001) 36761798-36782816 protein_coding
ENSMUST00000185871 (Zap70-005) 36766934-36771067 protein_coding
ENSMUST00000186624 (Zap70-004) 36770992-36772375 retained_intron
ENSMUST00000190128 (Zap70-002) 36778984-36782815 retained_intron
ENSMUSG00000037351 (Actr1b)
ARP1 actin-related protein 1B, centractin beta 		ENSMUST00000043951 (Actr1b-001) 36698116-36710008 protein_coding
ENSMUST00000159448 (Actr1b-002) 36701763-36709678 protein_coding
ENSMUST00000159675 (Actr1b-005) 36701213-36701651 retained_intron
ENSMUST00000160043 (Actr1b-006) 36702482-36707167 retained_intron
ENSMUST00000160084 (Actr1b-007) 36701784-36714422 protein_coding
ENSMUST00000162662 (Actr1b-003) 36706548-36709919 processed_transcript
ENSMUST00000162684 (Actr1b-008) 36701672-36709947 retained_intron
ENSMUSG00000097291 (Gm18828)
predicted gene, 18828 		ENSMUST00000180475 (Gm18828-001) 36765018-36765874 transcribed_processed_pseudogene
ENSMUST00000181035 (Gm18828-002) 36764863-36765172 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002U8_0001ENSG00000115073ENST00000289228ENST00000451664ENSG00000115085ENST00000264972ENST00000451498ENST00000463643ENST00000483781ENST00000487283ENST00000495754ENST00000498836ENSG00000201806ENST00000364936ENSG00000228486ENST00000428157ENST00000445382ENST00000450072ENST00000451384ENST00000458149ENST00000595588ENST00000596529ENST00000596740ENST00000597654ENST00000598144ENST00000598737ENST00000599435ENST00000599501ENST00000599959ENST00000600606ENST00000601127ENST00000603835ENST00000604986ENST00000605017ENST00000605282ENST00000605331ENST00000608777ENST00000609004ENST00000615201CIL_0002U8_0002ENSMUSG00000026117ENSMUST00000027291ENSMUST00000185871ENSMUST00000186624ENSMUST00000190128ENSMUSG00000037351ENSMUST00000043951ENSMUST00000159448ENSMUSG00000097291ENSMUST00000180475
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115073 ENST00000289228 21.014±0.00 23.630±0.00 1.501±0.00 29.369±18.07 12.212±11.20 13.549±11.20 11.847±10.15 16.934±12.21 10.379±6.59 6.695±5.47 16.367±9.67 23.418±11.60 17.929±6.24 15.573±8.85
ENST00000451664 N/A N/A N/A N/A 2.641±0.00 1.285±0.00 0.997±0.00 1.597±0.00 N/A N/A 2.760±0.00 27.360±24.12 18.327±0.00 15.521±0.00
ENST00000460427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000115085 ENST00000264972 0.280±0.00 7.358±0.00 N/A N/A 0.257±0.07 N/A N/A N/A 0.346±0.00 3.060±1.65 N/A 0.700±0.08 0.588±0.30 0.770±0.03
ENST00000451498 N/A N/A N/A N/A 0.308±0.00 0.202±0.05 N/A 0.371±0.00 N/A 3.892±0.00 N/A 0.645±0.00 0.650±0.29 0.864±0.00
ENST00000463643 N/A N/A N/A N/A N/A N/A 0.131±0.00 0.243±0.00 0.043±0.00 N/A N/A 0.318±0.00 0.303±0.00 1.157±0.00
ENST00000483781 N/A N/A 0.812±0.00 0.155±0.00 0.407±0.00 N/A N/A N/A 0.154±0.00 N/A N/A N/A N/A N/A
ENST00000487283 N/A 7.391±0.00 N/A 0.025±0.00 0.311±0.00 N/A 0.045±0.03 0.151±0.00 0.025±0.00 2.549±0.00 0.021±0.00 0.417±0.07 0.085±0.00 0.370±0.00
ENST00000489250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495754 N/A N/A N/A 0.145±0.00 N/A N/A 0.175±0.00 0.339±0.00 0.505±0.05 N/A 0.387±0.25 N/A N/A N/A
ENST00000498836 N/A N/A N/A N/A 0.789±0.00 N/A N/A N/A N/A N/A N/A 1.188±0.00 N/A N/A
ENSG00000201806 ENST00000364936 N/A 0.176±0.00 N/A 0.381±0.00 N/A N/A N/A N/A N/A N/A N/A 0.534±0.00 N/A N/A
ENSG00000228486 ENST00000428157 N/A N/A N/A 0.580±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445382 0.524±0.00 N/A N/A 0.381±0.00 N/A N/A N/A N/A 0.230±0.00 N/A 0.179±0.00 N/A N/A N/A
ENST00000450072 N/A N/A N/A N/A 0.843±0.00 0.516±0.00 N/A N/A 0.314±0.00 N/A N/A N/A N/A N/A
ENST00000451384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.031±0.32
ENST00000458149 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.408±0.00 N/A N/A N/A N/A
ENST00000594273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A
ENST00000596069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A
ENST00000596740 N/A 1.520±0.00 N/A N/A N/A N/A N/A N/A N/A 0.840±0.00 N/A N/A 0.137±0.00 N/A
ENST00000597654 N/A N/A 1.422±0.00 1.139±0.00 0.550±0.00 N/A N/A 0.492±0.00 N/A N/A N/A N/A 0.251±0.00 5.115±0.00
ENST00000597941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598144 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.521±0.00 N/A N/A N/A N/A
ENST00000598737 N/A N/A N/A N/A N/A N/A 0.288±0.00 1.338±0.00 N/A N/A N/A N/A 0.291±0.00 N/A
ENST00000598824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.229±0.00
ENST00000599501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.832±0.00
ENST00000599666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.081±0.00 N/A
ENST00000600331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600606 N/A N/A N/A 0.374±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601127 N/A N/A N/A N/A N/A N/A N/A N/A 0.360±0.00 N/A N/A N/A N/A N/A
ENST00000601499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603835 N/A N/A N/A N/A N/A N/A 0.162±0.00 N/A N/A N/A N/A 2.431±0.00 0.174±0.00 N/A
ENST00000604793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604986 N/A N/A N/A N/A N/A N/A 0.378±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000605017 N/A 1.835±0.00 N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605282 N/A N/A N/A N/A 0.293±0.00 0.116±0.00 0.145±0.00 0.381±0.00 N/A N/A 0.084±0.00 N/A N/A N/A
ENST00000605331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.226±0.00
ENST00000605866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608777 N/A N/A 0.500±0.00 0.708±0.00 1.387±0.00 0.948±0.00 0.176±0.00 0.636±0.00 N/A N/A N/A N/A 0.121±0.00 N/A
ENST00000609004 0.263±0.00 1.052±0.00 N/A 0.659±0.00 N/A N/A 0.206±0.00 0.683±0.00 0.092±0.00 0.403±0.03 N/A 0.658±0.00 0.146±0.03 N/A
ENST00000609295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615201 N/A N/A N/A 0.939±0.26 1.108±0.45 N/A N/A N/A 0.466±0.00 0.562±0.00 N/A N/A 0.245±0.00 N/A
ENST00000615478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026117 ENSMUST00000027291 0.798±0.44 0.711±0.20 0.436±0.01 0.727±0.28 13.780±5.72 0.617±0.37 0.164±0.04 0.641±0.44 0.076±0.05 1.833±0.37 0.204±0.16 0.956±0.44 0.311±0.21 0.675±0.30
ENSMUST00000185871 N/A N/A N/A N/A N/A N/A N/A 0.403±0.00 N/A 3.731±0.00 0.169±0.00 2.268±0.37 N/A N/A
ENSMUST00000186624 N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A
ENSMUST00000190128 N/A N/A N/A N/A N/A N/A 0.054±0.02 N/A 6.054±4.29 N/A 0.129±0.10 0.414±0.15 0.175±0.05 0.278±0.00
ENSMUSG00000037351 ENSMUST00000043951 43.090±1.87 85.892±1.03 42.962±4.81 54.071±12.84 40.503±15.29 94.916±5.23 32.816±2.63 57.673±4.73 25.665±6.95 49.522±3.50 39.335±2.32 53.793±25.09 25.432±5.24 12.829±5.83
ENSMUST00000159448 N/A N/A N/A N/A 20.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097291 ENSMUST00000180475 N/A N/A N/A 0.010±0.00 0.173±0.04 N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.02
ENSMUST00000181035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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