C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115183 TANC1 9606 + 2:158968634-159232659 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263635 TANC1-001 158968671-159232659 protein_coding
  ENST00000454300 TANC1-201 158968634-159232655 protein_coding
  ENST00000464096 TANC1-002 159136199-159150777 retained_intron
  ENST00000465963 TANC1-003 159147540-159150777 retained_intron
  ENST00000470074 TANC1-004 159199018-159232655 retained_intron
  ENST00000496406 TANC1-005 159224393-159232659 retained_intron

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000263635ENST00000454300ENST00000470074ENST00000496406
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000263635 3.884±0.00 7.578±0.00 1.663±0.00 2.704±0.00 3.772±0.00 3.752±0.69 8.905±2.96 4.124±0.00 1.745±1.16 5.434±2.42 4.632±1.17 2.804±0.44 1.293±0.58
ENST00000454300 N/A N/A N/A 0.570±0.00 N/A N/A N/A N/A N/A N/A 2.341±0.00 1.226±0.00 0.362±0.00
ENST00000470074 0.954±0.00 7.201±0.00 N/A 1.086±0.00 3.039±0.00 2.268±0.00 N/A 4.472±0.00 N/A 2.943±1.59 3.187±0.96 1.522±0.27 1.718±0.72
ENST00000496406 N/A N/A N/A N/A 1.206±0.00 N/A N/A N/A N/A 1.229±0.00 N/A N/A 0.214±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083G CIL_00083G_0001 VISTA 2:158622805-159223829
CIL_0007X8 CIL_0007X8_0001 VISTA 2:158652559-159256392
CIL_0008PS CIL_0008PS_0001 VISTA 2:158729476-159332500
CIL_0005U4 CIL_0005U4_0001 CGP 2:158795317-159232659
CIL_0008P7 CIL_0008P7_0001 VISTA 2:158911416-159511996
CIL_0005U3 CIL_0005U3_0001 CGP 2:158968634-159286799

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007520 IEA myoblast fusion
GO:0008542 IEA visual learning
GO:0030054 IEA cell junction
GO:0030425 IEA dendrite
GO:0043025 IEA neuronal cell body
GO:0043679 IEA axon terminus
GO:0045211 IEA postsynaptic membrane
GO:0097062 IEA dendritic spine maintenance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077073 tanc1a tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1a protein_coding Danio_rerio
ENSDARG00000089190 TANC1 (2 of 2) tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein_coding Danio_rerio
ENSMUSG00000035168 Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein_coding Mus_musculus

Loading