C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005U3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115183-ENSG00000196151 CGP 9606 2:158968634-159286799
GeneTranscriptPositionBiotype
ENSG00000115183 (TANC1)
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 		ENST00000263635 (TANC1-001) 158968671-159232659 protein_coding
ENST00000454300 (TANC1-201) 158968634-159232655 protein_coding
ENST00000464096 (TANC1-002) 159136199-159150777 retained_intron
ENST00000465963 (TANC1-003) 159147540-159150777 retained_intron
ENST00000470074 (TANC1-004) 159199018-159232655 retained_intron
ENST00000496406 (TANC1-005) 159224393-159232659 retained_intron
ENSG00000196151 (WDSUB1)
WD repeat, sterile alpha motif and U-box domain containing 1 		ENST00000358147 (WDSUB1-004) 159235798-159286703 protein_coding
ENST00000359774 (WDSUB1-001) 159235793-159286799 protein_coding
ENST00000392796 (WDSUB1-002) 159235801-159286552 protein_coding
ENST00000409124 (WDSUB1-003) 159235834-159286669 protein_coding
ENST00000409990 (WDSUB1-005) 159235801-159286592 protein_coding
ENSG00000213189 (BTF3L4P2)
basic transcription factor 3-like 4 pseudogene 2 		ENST00000392798 (BTF3L4P2-001) 159003975-159004320 processed_pseudogene
ENSG00000226878 (GSTM3P2)
glutathione S-transferase mu 3 pseudogene 2 		ENST00000412746 (GSTM3P2-001) 159056094-159056859 processed_pseudogene
ENSG00000275141 (MIR6888)
microRNA 6888 		ENST00000621977 (MIR6888-201) 159186835-159186901 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0005U3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035168-ENSMUSG00000026988 CGP 10090 2:59612042-59882591
GeneTranscriptPositionBiotype
ENSMUSG00000026988 (Wdsub1)
WD repeat, SAM and U-box domain containing 1 		ENSMUST00000028368 (Wdsub1-001) 59852364-59882584 protein_coding
ENSMUST00000102751 (Wdsub1-011) 59855187-59882547 protein_coding
ENSMUST00000127004 (Wdsub1-010) 59861333-59861680 processed_transcript
ENSMUST00000128671 (Wdsub1-005) 59876668-59882574 protein_coding
ENSMUST00000131285 (Wdsub1-006) 59878332-59882591 processed_transcript
ENSMUST00000133809 (Wdsub1-002) 59870329-59878164 protein_coding
ENSMUST00000138519 (Wdsub1-008) 59861688-59863561 processed_transcript
ENSMUST00000139689 (Wdsub1-007) 59861561-59876842 protein_coding
ENSMUST00000140475 (Wdsub1-004) 59876667-59882586 protein_coding
ENSMUST00000140852 (Wdsub1-012) 59873035-59878346 processed_transcript
ENSMUST00000144343 (Wdsub1-003) 59862673-59882557 processed_transcript
ENSMUST00000144823 (Wdsub1-009) 59861324-59862726 processed_transcript
ENSMUSG00000035168 (Tanc1)
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 		ENSMUST00000037526 (Tanc1-201) 59612044-59846149 protein_coding
ENSMUST00000056900 (Tanc1-005) 59742802-59821381 retained_intron
ENSMUST00000112568 (Tanc1-001) 59612042-59845717 protein_coding
ENSMUST00000126271 (Tanc1-008) 59769362-59772450 processed_transcript
ENSMUST00000127013 (Tanc1-004) 59706844-59724847 processed_transcript
ENSMUST00000128030 (Tanc1-010) 59630063-59647005 retained_intron
ENSMUST00000136248 (Tanc1-007) 59779711-59785499 processed_transcript
ENSMUST00000139863 (Tanc1-011) 59646811-59845717 protein_coding
ENSMUST00000142573 (Tanc1-009) 59612075-59649455 retained_intron
ENSMUST00000147650 (Tanc1-006) 59841740-59845715 retained_intron
ENSMUST00000162857 (Tanc1-012) 59806068-59809504 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005U3_0001ENSG00000115183ENST00000263635ENST00000454300ENST00000464096ENST00000465963ENST00000470074ENST00000496406ENSG00000196151ENST00000358147ENST00000359774ENST00000392796ENST00000409124ENST00000409990ENSG00000213189ENST00000392798ENSG00000226878ENST00000412746ENSG00000275141ENST00000621977CIL_0005U3_0002ENSMUSG00000026988ENSMUST00000028368ENSMUST00000102751ENSMUST00000127004ENSMUST00000128671ENSMUST00000131285ENSMUST00000133809ENSMUST00000138519ENSMUST00000139689ENSMUST00000140475ENSMUST00000140852ENSMUST00000144343ENSMUST00000144823ENSMUSG00000035168ENSMUST00000037526ENSMUST00000056900ENSMUST00000112568ENSMUST00000126271ENSMUST00000127013ENSMUST00000128030ENSMUST00000136248ENSMUST00000139863ENSMUST00000142573ENSMUST00000147650ENSMUST00000162857
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005U3_0001ENSG00000115183ENST00000263635ENST00000454300ENST00000470074ENST00000496406ENSG00000196151ENST00000358147ENST00000359774ENST00000392796ENST00000409124ENST00000409990ENSG00000213189ENST00000392798ENSG00000226878ENST00000412746ENSG00000275141ENST00000621977CIL_0005U3_0002ENSMUSG00000026988ENSMUST00000028368ENSMUST00000102751ENSMUST00000127004ENSMUST00000128671ENSMUST00000131285ENSMUST00000139689ENSMUST00000140475ENSMUSG00000035168ENSMUST00000037526ENSMUST00000112568ENSMUST00000139863ENSMUST00000147650
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115183 ENST00000263635 3.884±0.00 7.578±0.00 1.663±0.00 2.704±0.00 3.772±0.00 3.752±0.69 8.905±2.96 4.124±0.00 1.745±1.16 5.434±2.42 N/A 4.632±1.17 2.804±0.44 1.293±0.58
ENST00000454300 N/A N/A N/A 0.570±0.00 N/A N/A N/A N/A N/A N/A N/A 2.341±0.00 1.226±0.00 0.362±0.00
ENST00000464096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470074 0.954±0.00 7.201±0.00 N/A 1.086±0.00 3.039±0.00 2.268±0.00 N/A 4.472±0.00 N/A 2.943±1.59 N/A 3.187±0.96 1.522±0.27 1.718±0.72
ENST00000496406 N/A N/A N/A N/A 1.206±0.00 N/A N/A N/A N/A 1.229±0.00 N/A N/A N/A 0.214±0.00
ENSG00000196151 ENST00000358147 N/A 1.113±0.00 1.085±0.00 0.358±0.00 0.985±0.36 0.493±0.07 1.260±0.00 1.618±0.00 N/A N/A 0.686±0.00 3.794±1.88 0.896±0.00 1.303±0.07
ENST00000359774 1.833±0.00 N/A N/A 0.269±0.00 1.548±0.83 2.754±0.00 1.242±0.00 4.142±0.00 0.823±0.13 1.570±0.00 0.237±0.00 3.940±0.96 0.872±0.00 1.964±0.70
ENST00000392796 N/A N/A N/A N/A N/A N/A N/A 0.386±0.00 0.141±0.00 N/A 0.856±0.00 2.456±0.98 1.797±0.40 N/A
ENST00000409124 N/A N/A N/A N/A N/A N/A 0.345±0.00 N/A N/A 0.731±0.00 N/A N/A N/A N/A
ENST00000409990 N/A N/A N/A N/A N/A N/A N/A 2.773±0.00 N/A N/A N/A 2.392±0.00 1.707±0.46 N/A
ENSG00000213189 ENST00000392798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.092±0.00 N/A N/A
ENSG00000226878 ENST00000412746 N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A N/A 0.293±0.00 N/A N/A N/A N/A
ENSG00000275141 ENST00000621977 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.613±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026988 ENSMUST00000028368 3.852±0.78 2.890±0.17 9.478±2.17 1.388±0.14 3.071±0.71 3.678±0.54 2.611±0.65 3.344±0.82 1.521±0.46 4.518±1.12 2.556±0.94 5.642±1.48 1.804±0.85 1.740±0.47
ENSMUST00000102751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.624±0.00
ENSMUST00000127004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.910±0.00
ENSMUST00000128671 7.145±1.27 6.603±1.67 N/A N/A 4.659±1.12 4.893±0.52 3.411±0.44 3.763±0.57 1.492±0.31 6.191±1.24 4.111±0.00 5.393±0.00 N/A 2.736±0.69
ENSMUST00000131285 N/A 17.972±4.66 N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.179±0.00 N/A N/A
ENSMUST00000133809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139689 10.831±1.83 N/A 10.580±1.93 N/A 7.448±1.36 N/A 4.088±0.06 6.330±0.69 1.257±0.14 N/A N/A 11.301±1.03 2.579±1.06 3.994±1.00
ENSMUST00000140475 15.048±1.70 16.986±5.05 11.544±0.00 3.813±0.00 17.990±3.03 15.341±1.31 8.459±0.68 11.505±4.20 2.639±1.04 18.856±3.05 N/A 27.672±3.16 3.587±0.35 6.473±1.00
ENSMUST00000140852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035168 ENSMUST00000037526 1.295±0.42 1.012±0.34 1.249±0.10 N/A 1.229±0.00 1.144±0.00 0.586±0.00 1.567±0.14 0.309±0.14 1.722±0.00 0.248±0.00 N/A 1.124±0.42 N/A
ENSMUST00000056900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112568 3.238±0.23 2.950±1.19 3.223±0.51 3.117±3.26 3.560±1.06 3.201±0.92 2.525±0.73 3.560±1.62 0.547±0.18 8.500±1.70 0.740±0.24 9.622±5.49 5.058±2.62 0.433±0.16
ENSMUST00000126271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139863 2.774±0.00 1.303±0.00 1.213±0.16 0.558±0.16 2.415±0.84 1.848±0.22 0.772±0.29 2.786±1.21 0.208±0.08 2.495±0.00 0.384±0.13 7.235±4.01 4.367±1.10 0.121±0.00
ENSMUST00000142573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147650 4.876±1.24 1.954±0.65 5.147±0.42 0.675±0.01 2.611±0.58 3.498±0.89 1.217±0.03 6.982±1.50 0.639±0.21 6.846±0.55 0.595±0.14 7.872±0.93 3.102±1.14 3.558±1.73
ENSMUST00000162857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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