C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470074 TANC1-004 ENSG00000115183 9606 + 2:159199018-159232655 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungOvaryPlacentaTestisENST00000470074
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000470074 0.954±0.00 7.201±0.00 1.086±0.00 3.039±0.00 2.268±0.00 4.472±0.00 2.943±1.59 3.187±0.96 1.522±0.27 1.718±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083G CIL_00083G_0001 VISTA 2:158622805-159223829
CIL_0007X8 CIL_0007X8_0001 VISTA 2:158652559-159256392
CIL_0008PS CIL_0008PS_0001 VISTA 2:158729476-159332500
CIL_0005U4 CIL_0005U4_0001 CGP 2:158795317-159232659
CIL_0008P7 CIL_0008P7_0001 VISTA 2:158911416-159511996
CIL_0005U3 CIL_0005U3_0001 CGP 2:158968634-159286799

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037526 Tanc1-201 protein_coding Mus_musculus 0 2008
ENSMUST00000139863 Tanc1-011 protein_coding Mus_musculus 0 2008
ENSMUST00000112568 Tanc1-001 protein_coding Mus_musculus 0 2008
ENSMUST00000147650 Tanc1-006 retained_intron Mus_musculus 0 1347

Loading