C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LanC lantibiotic synthetase component C-like 1 (bacterial)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115365 LANCL1 9606 - 2:210431249-210477652 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000233714 LANCL1-004 210434115-210476705 protein_coding
  ENST00000412863 LANCL1-010 210434521-210440745 protein_coding
  ENST00000431941 LANCL1-003 210434487-210476775 protein_coding
  ENST00000441020 LANCL1-007 210431249-210476757 protein_coding
  ENST00000443314 LANCL1-005 210431249-210476739 protein_coding
  ENST00000448951 LANCL1-008 210440699-210477652 protein_coding
  ENST00000450366 LANCL1-001 210431249-210476767 protein_coding
  ENST00000453956 LANCL1-009 210455259-210476705 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000431941ENST00000441020ENST00000443314ENST00000450366
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000431941 N/A N/A 1.364±0.00 N/A N/A N/A N/A N/A N/A N/A 2.446±0.00 1.631±0.00 3.090±0.00 20.085±10.23
ENST00000441020 N/A N/A 1.620±0.00 25.057±0.00 N/A 4.104±0.00 N/A N/A 0.260±0.00 5.859±0.00 1.385±0.00 2.669±1.24 3.214±1.42 12.346±0.00
ENST00000443314 N/A N/A N/A N/A N/A 1.194±0.00 2.566±0.00 N/A 0.746±0.25 N/A N/A 0.998±0.00 N/A N/A
ENST00000450366 5.826±0.00 5.596±0.00 N/A 28.549±15.31 5.826±4.14 3.915±2.16 5.517±3.88 8.731±0.00 3.966±0.00 4.004±0.00 3.517±0.00 6.637±1.36 1.959±0.39 13.329±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AJ CIL_0000AJ_0002 CGP 2:210290150-210477652
CIL_0006P4 CIL_0006P4_0001 CGP 2:210431249-210679107

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004930 TAS G-protein coupled receptor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008152 IEA metabolic process
GO:0008270 IDA zinc ion binding
GO:0017124 IPI SH3 domain binding
GO:0043295 IDA glutathione binding
GO:0050750 IDA low-density lipoprotein particle receptor binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013741 lancl1 LanC antibiotic synthetase component C-like 1 (bacterial) protein_coding Danio_rerio
ENSMUSG00000026000 Lancl1 LanC (bacterial lantibiotic synthetase component C)-like 1 protein_coding Mus_musculus

Loading