C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LanC lantibiotic synthetase component C-like 1 (bacterial)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441020 LANCL1-007 ENSG00000115365 9606 - 2:210431249-210476757 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLiverLungMuscleOvaryPlacentaTestisENST00000441020
Transcript ID Bladder Brain Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000441020 1.620±0.00 25.057±0.00 4.104±0.00 0.260±0.00 5.859±0.00 1.385±0.00 2.669±1.24 3.214±1.42 12.346±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AJ CIL_0000AJ_0002 CGP 2:210290150-210477652
CIL_0006P4 CIL_0006P4_0001 CGP 2:210431249-210679107

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004930 TAS G-protein coupled receptor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008152 IEA metabolic process
GO:0008270 IDA zinc ion binding
GO:0017124 IPI SH3 domain binding
GO:0043295 IDA glutathione binding
GO:0050750 IDA low-density lipoprotein particle receptor binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119559 Lancl1-003 protein_coding Mus_musculus 0 1417
ENSMUST00000113979 Lancl1-002 protein_coding Mus_musculus 0 1417
ENSMUST00000027149 Lancl1-001 protein_coding Mus_musculus 0 1417
ENSMUST00000133508 Lancl1-005 processed_transcript Mus_musculus 0 235

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