C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006P4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115365-ENSG00000021826 CGP 9606 2:210431249-210679107
GeneTranscriptPositionBiotype
ENSG00000021826 (CPS1)
carbamoyl-phosphate synthase 1, mitochondrial 		ENST00000233072 (CPS1-001) 210556538-210679107 protein_coding
ENST00000417946 (CPS1-002) 210477682-210576474 protein_coding
ENST00000430249 (CPS1-011) 210477709-210679107 protein_coding
ENST00000451903 (CPS1-003) 210593366-210679107 protein_coding
ENST00000467353 (CPS1-006) 210604965-210606771 retained_intron
ENST00000470791 (CPS1-008) 210658383-210663146 retained_intron
ENST00000479988 (CPS1-004) 210671615-210679107 retained_intron
ENST00000497121 (CPS1-007) 210631228-210647934 processed_transcript
ENST00000497163 (CPS1-005) 210577155-210579800 retained_intron
ENST00000518043 (CPS1-010) 210477682-210576474 protein_coding
ENST00000523702 (CPS1-009) 210477690-210577493 protein_coding
ENST00000619804 (CPS1-201) 210556734-210599555 protein_coding
ENSG00000234281 (LANCL1-AS1)
LANCL1 antisense RNA 1 		ENST00000416344 (LANCL1-AS1-003) 210460475-210469246 antisense
ENST00000420418 (LANCL1-AS1-001) 210324766-210468694 antisense
ENST00000433296 (LANCL1-AS1-002) 210324759-210460882 antisense

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Structures from Ensembl
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CIL_0006P4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026000-ENSMUSG00000025991 CGP 10090 1:67000517-67231259
GeneTranscriptPositionBiotype
ENSMUSG00000025991 (Cps1)
carbamoyl-phosphate synthetase 1 		ENSMUST00000027144 (Cps1-001) 67123026-67231259 protein_coding
ENSMUSG00000026000 (Lancl1)
LanC (bacterial lantibiotic synthetase component C)-like 1 		ENSMUST00000027149 (Lancl1-001) 67000517-67038865 protein_coding
ENSMUST00000113979 (Lancl1-002) 67000517-67038872 protein_coding
ENSMUST00000119559 (Lancl1-003) 67003375-67038834 protein_coding
ENSMUST00000133508 (Lancl1-005) 67007018-67021065 processed_transcript
ENSMUST00000149996 (Lancl1-004) 67009933-67038834 protein_coding
ENSMUST00000189210 (Lancl1-006) 67019609-67022218 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006P4_0001ENSG00000021826ENST00000233072ENST00000417946ENST00000430249ENST00000451903ENST00000467353ENST00000470791ENST00000479988ENST00000497121ENST00000497163ENST00000518043ENST00000523702ENST00000619804ENSG00000234281ENST00000416344ENST00000420418ENST00000433296CIL_0006P4_0002ENSMUSG00000025991ENSMUST00000027144ENSMUSG00000026000ENSMUST00000027149ENSMUST00000113979ENSMUST00000119559ENSMUST00000133508ENSMUST00000149996ENSMUST00000189210
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006P4_0001ENSG00000021826ENST00000233072ENST00000417946ENST00000430249ENST00000451903ENST00000479988ENST00000619804ENSG00000234281ENST00000416344ENST00000420418ENST00000433296CIL_0006P4_0002ENSMUSG00000025991ENSMUST00000027144ENSMUSG00000026000ENSMUST00000027149ENSMUST00000113979ENSMUST00000119559ENSMUST00000149996
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000021826 ENST00000233072 N/A N/A N/A 0.165±0.04 1.392±0.00 N/A N/A 382.814±0.00 N/A N/A N/A N/A 0.204±0.03 N/A
ENST00000417946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.112±0.00 N/A N/A N/A
ENST00000430249 0.381±0.00 0.062±0.00 0.285±0.00 0.379±0.00 0.341±0.00 0.095±0.00 0.156±0.11 30.408±29.81 83.066±0.00 0.194±0.09 0.076±0.00 0.353±0.20 0.133±0.00 0.876±0.02
ENST00000451903 N/A 0.193±0.00 N/A N/A N/A 0.239±0.00 0.350±0.00 N/A N/A N/A 0.082±0.05 N/A N/A 3.905±0.08
ENST00000467353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479988 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00 N/A 0.029±0.00 N/A N/A
ENST00000497121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619804 N/A N/A 0.537±0.00 1.994±0.00 0.822±0.29 0.680±0.00 0.404±0.00 284.413±0.00 0.620±0.00 N/A N/A N/A N/A N/A
ENSG00000234281 ENST00000416344 0.028±0.00 N/A N/A 0.565±0.00 N/A N/A N/A N/A 0.167±0.00 0.233±0.00 1.840±0.00 0.215±0.16 0.035±0.00 0.101±0.00
ENST00000420418 N/A 0.204±0.00 N/A N/A N/A 0.139±0.00 0.047±0.00 N/A N/A N/A 1.505±1.15 0.063±0.03 0.107±0.00 0.216±0.12
ENST00000433296 0.039±0.00 0.065±0.00 0.548±0.00 0.651±0.00 0.111±0.00 N/A 0.097±0.02 0.088±0.00 0.078±0.04 0.078±0.00 N/A 0.041±0.01 N/A 0.069±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025991 ENSMUST00000027144 0.074±0.06 0.142±0.02 0.015±0.01 0.044±0.02 1.081±0.11 0.717±0.23 0.066±0.06 0.019±0.01 310.381±264.09 0.117±0.07 0.026±0.02 0.198±0.21 0.165±0.12 0.144±0.04
ENSMUSG00000026000 ENSMUST00000027149 N/A N/A 3.012±0.53 2.226±0.00 N/A N/A N/A N/A 1.337±0.29 N/A N/A 1.084±0.00 N/A N/A
ENSMUST00000113979 5.398±2.83 30.601±7.12 2.283±0.00 2.918±0.52 9.434±5.64 9.626±0.55 2.063±0.54 4.932±1.95 2.443±1.04 8.489±3.34 1.315±0.18 11.570±7.78 0.999±0.31 28.938±3.95
ENSMUST00000119559 11.703±0.83 N/A 33.106±11.56 43.531±10.11 18.265±8.46 5.827±0.88 9.712±2.42 15.322±2.53 9.538±3.37 7.035±1.56 19.258±2.23 18.299±6.07 13.787±1.40 231.751±85.41
ENSMUST00000133508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149996 17.649±1.97 22.542±2.40 N/A N/A 17.615±2.64 13.118±1.95 N/A 16.090±0.00 N/A N/A N/A 27.316±5.09 N/A N/A
ENSMUST00000189210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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