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Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LanC (bacterial lantibiotic synthetase component C)-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026000 Lancl1 10090 - 1:67000517-67038872 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027149 Lancl1-001 67000517-67038865 protein_coding
  ENSMUST00000113979 Lancl1-002 67000517-67038872 protein_coding
  ENSMUST00000119559 Lancl1-003 67003375-67038834 protein_coding
  ENSMUST00000133508 Lancl1-005 67007018-67021065 processed_transcript
  ENSMUST00000149996 Lancl1-004 67009933-67038834 protein_coding
  ENSMUST00000189210 Lancl1-006 67019609-67022218 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027149ENSMUST00000113979ENSMUST00000119559ENSMUST00000149996
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027149 N/A N/A 3.012±0.53 2.226±0.00 N/A N/A N/A N/A 1.337±0.29 N/A N/A 1.084±0.00 N/A N/A
ENSMUST00000113979 5.398±2.83 30.601±7.12 2.283±0.00 2.918±0.52 9.434±5.64 9.626±0.55 2.063±0.54 4.932±1.95 2.443±1.04 8.489±3.34 1.315±0.18 11.570±7.78 0.999±0.31 28.938±3.95
ENSMUST00000119559 11.703±0.83 N/A 33.106±11.56 43.531±10.11 18.265±8.46 5.827±0.88 9.712±2.42 15.322±2.53 9.538±3.37 7.035±1.56 19.258±2.23 18.299±6.07 13.787±1.40 231.751±85.41
ENSMUST00000149996 17.649±1.97 22.542±2.40 N/A N/A 17.615±2.64 13.118±1.95 N/A 16.090±0.00 N/A N/A N/A 27.316±5.09 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AJ CIL_0000AJ_0003 CGP 1:66924295-67038872
CIL_0006P4 CIL_0006P4_0002 CGP 1:67000517-67231259

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008152 IEA metabolic process
GO:0008270 ISS zinc ion binding
GO:0017124 IEA SH3 domain binding
GO:0043295 ISS glutathione binding
GO:0050750 ISO low-density lipoprotein particle receptor binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013741 lancl1 LanC antibiotic synthetase component C-like 1 (bacterial) protein_coding Danio_rerio
ENSG00000115365 LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) protein_coding Homo_sapiens

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