C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: par-3 family cell polarity regulator beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116117 PARD3B 9606 + 2:204545793-205620162 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000349953 PARD3B-004 204546000-205615813 protein_coding
  ENST00000351153 PARD3B-003 204546000-205615813 protein_coding
  ENST00000358768 PARD3B-002 204546000-205615813 protein_coding
  ENST00000406610 PARD3B-001 204545793-205620162 protein_coding
  ENST00000415947 PARD3B-006 204545793-205048595 nonsense_mediated_decay
  ENST00000462231 PARD3B-005 204545840-205301907 protein_coding
  ENST00000465890 PARD3B-010 205293492-205301511 processed_transcript
  ENST00000471958 PARD3B-007 204545842-204558186 processed_transcript
  ENST00000488622 PARD3B-008 205482590-205616062 processed_transcript
  ENST00000489565 PARD3B-009 205103692-205121688 processed_transcript
  ENST00000494482 PARD3B-011 205347809-205440471 processed_transcript
  ENST00000613457 PARD3B-201 204965152-205620162 protein_coding
  ENST00000614500 PARD3B-202 204965152-205620162 protein_coding
  ENST00000622699 PARD3B-203 204965152-205620162 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000351153ENST00000358768ENST00000406610ENST00000462231ENST00000613457ENST00000614500ENST00000622699
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000351153 N/A N/A N/A 0.187±0.00 0.814±0.00 1.862±0.00 0.365±0.00 N/A 2.243±0.00 1.733±0.00 N/A N/A N/A N/A
ENST00000358768 N/A N/A N/A N/A 1.381±0.00 N/A 0.447±0.00 N/A N/A N/A N/A 0.811±0.25 N/A N/A
ENST00000406610 N/A 0.848±0.00 1.130±0.00 0.731±0.00 1.648±0.29 2.193±0.00 0.277±0.13 0.353±0.01 2.091±0.00 1.307±0.70 N/A 2.250±1.26 0.541±0.10 0.876±0.60
ENST00000462231 N/A N/A 1.897±0.00 N/A 0.948±0.00 N/A N/A 1.002±0.00 N/A N/A 0.909±0.00 N/A N/A N/A
ENST00000613457 0.800±0.00 0.916±0.00 N/A N/A 0.926±0.00 N/A N/A 0.787±0.00 0.180±0.00 0.850±0.00 0.643±0.00 0.277±0.00 1.374±0.00 1.174±0.00
ENST00000614500 0.561±0.00 N/A N/A N/A 1.286±0.00 2.766±0.00 0.345±0.00 1.339±0.00 N/A N/A N/A N/A 0.320±0.00 1.529±0.00
ENST00000622699 N/A N/A 0.577±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.208±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001R0 CIL_0001R0_0001 CGP 2:203936748-205620162
CIL_0001R1 CIL_0001R1_0001 CGP 2:204545793-205798133

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005923 IEA tight junction
GO:0007049 IEA cell cycle
GO:0016020 IEA membrane
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034555 PARD3B (1 of 2) par-3 family cell polarity regulator beta protein_coding Danio_rerio
ENSDARG00000067785 PARD3B (2 of 2) par-3 family cell polarity regulator beta protein_coding Danio_rerio
ENSMUSG00000052062 Pard3b par-3 family cell polarity regulator beta protein_coding Mus_musculus

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