C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: par-3 family cell polarity regulator beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052062 Pard3b 10090 + 1:61638824-62642284 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046673 Pard3b-002 61639243-62637923 protein_coding
  ENSMUST00000075374 Pard3b-001 61638824-62642284 protein_coding
  ENSMUST00000094906 Pard3b-003 61639243-62642284 protein_coding
  ENSMUST00000129030 Pard3b-005 61638875-61769859 retained_intron
  ENSMUST00000138768 Pard3b-004 61638824-62078259 processed_transcript
  ENSMUST00000188325 Pard3b-007 61638886-62169299 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046673ENSMUST00000075374ENSMUST00000094906ENSMUST00000129030ENSMUST00000138768
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046673 0.526±0.00 1.625±0.51 N/A N/A 0.701±0.00 1.550±0.15 0.519±0.00 0.933±0.19 0.185±0.00 1.384±0.22 N/A 1.114±0.15 N/A 0.858±0.45
ENSMUST00000075374 2.098±1.19 0.867±0.17 5.985±0.99 0.792±0.43 0.967±0.28 2.786±0.19 0.764±0.48 1.245±0.50 0.395±0.11 2.664±0.42 0.545±0.19 2.119±0.44 0.498±0.17 0.665±0.14
ENSMUST00000094906 N/A N/A 0.911±0.00 N/A N/A N/A N/A N/A 0.078±0.00 N/A 0.339±0.07 0.897±0.00 0.501±0.00 N/A
ENSMUST00000129030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.862±0.00 N/A N/A
ENSMUST00000138768 N/A 2.905±1.26 N/A N/A 2.325±0.34 3.707±1.23 N/A N/A 0.237±0.05 4.494±0.56 N/A 2.352±0.75 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001R0 CIL_0001R0_0002 CGP 1:60977927-62642284
CIL_0001R1 CIL_0001R1_0002 CGP 1:61638824-62818695

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005923 IEA tight junction
GO:0007049 IEA cell cycle
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034555 PARD3B (1 of 2) par-3 family cell polarity regulator beta protein_coding Danio_rerio
ENSDARG00000067785 PARD3B (2 of 2) par-3 family cell polarity regulator beta protein_coding Danio_rerio
ENSG00000116117 PARD3B par-3 family cell polarity regulator beta protein_coding Homo_sapiens

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