C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00071P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000118804-ENSG00000163749 CGP 9606 4:76306026-76421868
GeneTranscriptPositionBiotype
ENSG00000118804 (FAM47E-STBD1)
FAM47E-STBD1 readthrough 		ENST00000237642 (FAM47E-STBD1-001) 76306026-76311599 protein_coding
ENSG00000163749 (CCDC158)
coiled-coil domain containing 158 		ENST00000388914 (CCDC158-002) 76313002-76407305 protein_coding
ENST00000434846 (CCDC158-005) 76375177-76407323 protein_coding
ENST00000504667 (CCDC158-009) 76312997-76367634 retained_intron
ENST00000504868 (CCDC158-006) 76396269-76421868 processed_transcript
ENST00000509851 (CCDC158-008) 76384379-76421843 retained_intron
ENSG00000240426 (RP11-356M17.1)
 ENST00000485172 (RP11-356M17.1-001) 76401251-76401569 processed_pseudogene
ENSG00000249858 (SNX5P1)
sorting nexin 5 pseudogene 1 		ENST00000505757 (SNX5P1-001) 76344550-76345590 processed_pseudogene
ENSG00000272414 (FAM47E-STBD1)
FAM47E-STBD1 readthrough 		ENST00000509377 (FAM47E-STBD1-003) 76251733-76310044 nonsense_mediated_decay
ENST00000514140 (FAM47E-STBD1-001) 76263812-76311129 protein_coding
ENST00000514365 (FAM47E-STBD1-002) 76251732-76310379 nonsense_mediated_decay
ENST00000515604 (FAM47E-STBD1-004) 76251721-76311120 protein_coding
CIL_00071P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047963-ENSMUSG00000050050 CGP 10090 5:92603051-92675271
GeneTranscriptPositionBiotype
ENSMUSG00000047963 (Stbd1)
starch binding domain 1 		ENSMUST00000050952 (Stbd1-201) 92603051-92606579 protein_coding
ENSMUSG00000050050 (Ccdc158)
coiled-coil domain containing 158 		ENSMUST00000060930 (Ccdc158-001) 92608253-92675125 protein_coding
ENSMUST00000136004 (Ccdc158-003) 92607954-92612503 retained_intron
ENSMUST00000150359 (Ccdc158-004) 92652054-92675271 protein_coding
ENSMUST00000151180 (Ccdc158-002) 92652054-92675265 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071P_0001ENSG00000118804ENST00000237642ENSG00000163749ENST00000388914ENST00000434846ENST00000504667ENST00000504868ENST00000509851ENSG00000240426ENST00000485172ENSG00000249858ENST00000505757ENSG00000272414ENST00000509377ENST00000514140ENST00000514365ENST00000515604CIL_00071P_0002ENSMUSG00000047963ENSMUST00000050952ENSMUSG00000050050ENSMUST00000060930ENSMUST00000136004ENSMUST00000150359ENSMUST00000151180
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071P_0001ENSG00000118804ENST00000237642ENSG00000163749ENST00000388914ENST00000434846ENST00000504667ENST00000504868ENSG00000240426ENST00000485172ENSG00000249858ENST00000505757ENSG00000272414ENST00000509377ENST00000514140ENST00000514365ENST00000515604CIL_00071P_0002ENSMUSG00000047963ENSMUST00000050952ENSMUSG00000050050ENSMUST00000060930ENSMUST00000136004ENSMUST00000150359ENSMUST00000151180
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000118804 ENST00000237642 N/A 1.846±0.00 0.396±0.00 0.713±0.00 5.360±3.12 1.839±0.01 2.464±1.51 7.938±0.00 1.787±0.00 1.900±1.02 5.758±0.21 1.761±0.44 4.118±0.77 2.481±0.38
ENSG00000163749 ENST00000388914 N/A N/A 0.453±0.00 N/A N/A N/A N/A N/A 0.068±0.00 0.188±0.00 N/A 0.014±0.00 0.009±0.00 11.662±2.81
ENST00000434846 N/A N/A N/A N/A 0.037±0.00 N/A 0.097±0.00 N/A 0.058±0.00 N/A N/A 0.118±0.00 N/A N/A
ENST00000504667 0.089±0.00 0.076±0.00 N/A N/A 0.154±0.00 0.077±0.00 0.016±0.00 0.278±0.00 0.033±0.00 N/A 0.031±0.00 0.029±0.01 0.034±0.02 N/A
ENST00000504868 N/A N/A N/A N/A N/A 0.160±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240426 ENST00000485172 N/A N/A N/A N/A 0.049±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249858 ENST00000505757 N/A N/A N/A N/A 0.222±0.00 0.333±0.00 N/A N/A N/A 0.238±0.00 0.030±0.00 N/A N/A 0.055±0.00
ENSG00000272414 ENST00000509377 N/A N/A 0.505±0.00 N/A N/A N/A N/A N/A N/A 0.882±0.00 N/A N/A N/A N/A
ENST00000514140 N/A 2.345±0.00 N/A N/A N/A 2.225±0.00 0.997±0.00 1.507±0.00 N/A N/A N/A 3.788±1.14 3.051±1.55 3.103±0.00
ENST00000514365 N/A 1.706±0.00 N/A N/A N/A N/A N/A N/A 2.333±0.00 N/A N/A 4.475±0.00 6.419±0.00 3.305±0.00
ENST00000515604 N/A N/A N/A 3.165±0.00 N/A N/A N/A N/A N/A 4.751±0.00 N/A 0.755±0.00 N/A 2.772±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000047963 ENSMUST00000050952 3.593±1.44 2.738±0.23 6.668±0.08 1.236±0.30 2.631±1.42 1.748±0.30 2.519±0.31 2.981±0.25 11.297±9.88 7.617±2.52 14.033±2.74 11.601±3.45 2.483±0.99 0.925±0.29
ENSMUSG00000050050 ENSMUST00000060930 N/A 0.039±0.01 0.094±0.00 0.039±0.02 0.040±0.01 0.033±0.01 0.010±0.00 0.030±0.00 0.027±0.01 0.091±0.05 0.021±0.01 0.363±0.23 0.126±0.09 18.723±14.96
ENSMUST00000136004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.00 N/A 0.242±0.06 N/A
ENSMUST00000150359 0.048±0.01 0.062±0.06 0.317±0.13 0.053±0.00 0.042±0.01 N/A 0.029±0.00 0.150±0.04 0.061±0.06 N/A 0.018±0.01 0.462±0.20 0.052±0.04 4.710±0.22
ENSMUST00000151180 0.048±0.01 0.069±0.05 N/A 0.198±0.00 0.060±0.04 0.056±0.01 0.029±0.00 0.108±0.00 0.068±0.05 N/A 0.018±0.01 0.785±0.27 0.016±0.01 N/A

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