C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon-induced protein with tetratricopeptide repeats 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371826 IFIT2-001 ENSG00000119922 9606 + 10:89301955-89309276 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverLungOvaryTestisENST00000371826
Transcript ID Adrenal Brain Liver Lung Ovary Testis
ENST00000371826 0.505±0.00 0.618±0.23 0.153±0.04 1.542±0.58 0.707±0.22 0.318±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IW CIL_0001IW_0001 CGP 10:89205629-89414557
CIL_0001IT CIL_0001IT_0001 CGP 10:89213569-89414557
CIL_0007BE CIL_0007BE_0006 CGP 10:89301955-89340971

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005829 TAS cytosol
GO:0008637 TAS apoptotic mitochondrial changes
GO:0009615 IDA response to virus
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0032091 IDA negative regulation of protein binding
GO:0035457 IEA cellular response to interferon-alpha
GO:0043065 IDA positive regulation of apoptotic process
GO:0044822 IDA poly(A) RNA binding
GO:0051607 IEA defense response to virus
GO:0060337 TAS type I interferon signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102826 Ifit2-001 protein_coding Mus_musculus 0 665

Loading