C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon-induced protein with tetratricopeptide repeats 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611722 IFIT2-201 ENSG00000119922 9606 + 10:89302046-89308919 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000611722
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000611722 2.219±0.00 2.459±0.00 1.915±0.00 2.044±0.82 3.488±1.50 1.324±0.44 1.179±0.31 3.556±0.14 1.032±0.21 4.447±1.30 0.437±0.37 1.867±0.78 5.683±1.13 1.746±1.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IW CIL_0001IW_0001 CGP 10:89205629-89414557
CIL_0001IT CIL_0001IT_0001 CGP 10:89213569-89414557
CIL_0007BE CIL_0007BE_0006 CGP 10:89301955-89340971

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005829 TAS cytosol
GO:0008637 TAS apoptotic mitochondrial changes
GO:0009615 IDA response to virus
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0032091 IDA negative regulation of protein binding
GO:0043065 IDA positive regulation of apoptotic process
GO:0044822 IDA poly(A) RNA binding
GO:0051607 IEA defense response to virus
GO:0060337 TAS type I interferon signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102826 Ifit2-001 protein_coding Mus_musculus 0 665

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