C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: homeobox B8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000120068 HOXB8 9606 - 17:48611377-48614939 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000239144 HOXB8-001 48612346-48614939 protein_coding
  ENST00000498634 HOXB8-003 48611377-48613479 protein_coding
  ENST00000576562 HOXB8-002 48613188-48614704 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000239144ENST00000498634ENST00000576562
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000239144 0.135±0.00 0.373±0.00 1.443±0.00 0.349±0.00 0.014±0.00 5.150±0.00 N/A 0.224±0.00 0.665±0.35 0.284±0.13 2.292±0.00
ENST00000498634 N/A 0.274±0.00 N/A 2.155±0.00 N/A N/A N/A N/A N/A 0.187±0.00 N/A
ENST00000576562 N/A N/A N/A N/A N/A 7.273±0.00 0.266±0.00 N/A 1.347±1.34 0.224±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0001 VISTA 17:48304888-48905406

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0007625 IEA grooming behavior
GO:0008344 IEA adult locomotory behavior
GO:0009952 IEA anterior/posterior pattern specification
GO:0019233 IEA sensory perception of pain
GO:0021516 IEA dorsal spinal cord development
GO:0043565 IEA sequence-specific DNA binding
GO:0045638 ISS negative regulation of myeloid cell differentiation
GO:0048704 IEA embryonic skeletal system morphogenesis
GO:0048705 IEA skeletal system morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054025 hoxb8b homeo box B8b protein_coding Danio_rerio
ENSDARG00000056027 hoxb8a homeo box B8a protein_coding Danio_rerio
ENSMUSG00000056648 Hoxb8 homeobox B8 protein_coding Mus_musculus

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