C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forty-two-three domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424384 FYTTD1-006 ENSG00000122068 9606 + 3:197750390-197782380 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyENST00000424384
Transcript ID Breast Kidney
ENST00000424384 5.980±1.50 2.120±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CE CIL_0006CE_0001 CGP 3:197671393-197787596
CIL_0006C7 CIL_0006C7_0001 CGP 3:197737179-197888436

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003729 IDA mRNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0006406 IMP mRNA export from nucleus
GO:0016607 IDA nuclear speck
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023489 Fyttd1-001 protein_coding Mus_musculus 0 1303
ENSMUST00000141590 Fyttd1-003 retained_intron Mus_musculus 0 621
ENSMUST00000171325 Fyttd1-201 protein_coding Mus_musculus 0 514
ENSMUST00000149183 Fyttd1-004 retained_intron Mus_musculus 0 466
ENSMUST00000135854 Fyttd1-009 retained_intron Mus_musculus 0 460
ENSMUST00000120345 Fyttd1-007 protein_coding Mus_musculus 0 411
ENSMUST00000145146 Fyttd1-002 processed_transcript Mus_musculus 0 363
ENSMUST00000143151 Fyttd1-010 processed_transcript Mus_musculus 0 350
ENSMUST00000137863 Fyttd1-005 retained_intron Mus_musculus 0 331
ENSMUST00000125843 Fyttd1-006 processed_transcript Mus_musculus 0 327
ENSMUST00000127493 Fyttd1-008 retained_intron Mus_musculus 0 200

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