C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forty-two-three domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000241502 FYTTD1-001 ENSG00000122068 9606 + 3:197749750-197787596 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000241502
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000241502 9.513±0.00 7.620±0.00 1.423±0.00 3.008±0.00 5.680±2.43 1.965±0.00 2.550±0.00 1.705±0.00 6.543±0.00 3.841±0.00 2.565±0.48 4.410±3.15 6.911±0.00 14.834±1.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CE CIL_0006CE_0001 CGP 3:197671393-197787596
CIL_0006C7 CIL_0006C7_0001 CGP 3:197737179-197888436

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003729 IDA mRNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0006406 IMP mRNA export from nucleus
GO:0016607 IDA nuclear speck
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023489 Fyttd1-001 protein_coding Mus_musculus 0 1461
ENSMUST00000141590 Fyttd1-003 retained_intron Mus_musculus 0 732
ENSMUST00000171325 Fyttd1-201 protein_coding Mus_musculus 0 627
ENSMUST00000149183 Fyttd1-004 retained_intron Mus_musculus 0 616
ENSMUST00000145146 Fyttd1-002 processed_transcript Mus_musculus 0 512
ENSMUST00000135854 Fyttd1-009 retained_intron Mus_musculus 0 460
ENSMUST00000120345 Fyttd1-007 protein_coding Mus_musculus 0 411
ENSMUST00000143151 Fyttd1-010 processed_transcript Mus_musculus 0 350
ENSMUST00000137863 Fyttd1-005 retained_intron Mus_musculus 0 331
ENSMUST00000125843 Fyttd1-006 processed_transcript Mus_musculus 0 327
ENSMUST00000127493 Fyttd1-008 retained_intron Mus_musculus 0 200

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