C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger CCCH-type containing 7A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355758 ZC3H7A-001 ENSG00000122299 9606 - 16:11750586-11797267 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355758
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355758 3.610±0.00 4.601±0.00 1.858±1.05 5.081±0.00 2.515±0.00 3.084±2.28 3.005±2.62 2.806±0.69 2.849±0.26 4.323±2.92 4.548±2.78 4.431±2.12 5.245±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DU CIL_0007DU_0001 CGP 16:11679080-11797267
CIL_0007DT CIL_0007DT_0001 CGP 16:11750586-11851585

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037633 Zc3h7a-001 protein_coding Mus_musculus 0 3925
ENSMUST00000138185 Zc3h7a-002 protein_coding Mus_musculus 0 2560
ENSMUST00000128083 Zc3h7a-006 protein_coding Mus_musculus 0 1923
ENSMUST00000140755 Zc3h7a-009 nonsense_mediated_decay Mus_musculus 0 1696
ENSMUST00000140775 Zc3h7a-018 retained_intron Mus_musculus 0 944
ENSMUST00000138282 Zc3h7a-015 retained_intron Mus_musculus 0 808
ENSMUST00000130355 Zc3h7a-008 protein_coding Mus_musculus 0 708
ENSMUST00000142844 Zc3h7a-010 retained_intron Mus_musculus 0 534
ENSMUST00000145457 Zc3h7a-003 retained_intron Mus_musculus 0 435
ENSMUST00000143121 Zc3h7a-014 retained_intron Mus_musculus 0 409
ENSMUST00000155343 Zc3h7a-012 retained_intron Mus_musculus 0 366
ENSMUST00000125537 Zc3h7a-007 protein_coding Mus_musculus 0 302
ENSMUST00000142389 Zc3h7a-005 protein_coding Mus_musculus 0 294
ENSMUST00000155340 Zc3h7a-011 retained_intron Mus_musculus 0 283
ENSMUST00000139391 Zc3h7a-016 retained_intron Mus_musculus 2e-34 152

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