C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ciliary neurotrophic factor receptor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122756 CNTFR 9606 - 9:34551432-34590140 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000351266 CNTFR-002 34551432-34589706 protein_coding
  ENST00000378980 CNTFR-001 34551432-34589737 protein_coding
  ENST00000417345 CNTFR-003 34556255-34590123 protein_coding
  ENST00000610543 CNTFR-201 34551434-34590140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000351266ENST00000378980ENST00000417345
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000351266 12.920±0.00 3.005±0.00 0.202±0.00 16.159±0.00 13.586±0.00 1.763±0.87 0.819±0.00 1.213±0.00 0.280±0.00 2.044±0.00 23.816±0.00 1.989±0.00 5.270±1.68 5.132±0.00
ENST00000378980 9.311±0.00 1.467±0.00 N/A 5.076±0.30 3.147±2.72 N/A 0.632±0.26 N/A 1.281±0.01 0.701±0.22 9.174±5.27 5.370±0.00 4.144±3.41 3.595±0.04
ENST00000417345 N/A N/A N/A 8.840±0.00 N/A 1.092±0.00 0.550±0.00 0.351±0.00 N/A N/A N/A N/A 1.199±0.73 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XA CIL_0002XA_0001 CGP 9:34521040-34590140

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001967 IEA suckling behavior
GO:0003360 IEA brainstem development
GO:0004897 IDA ciliary neurotrophic factor receptor activity
GO:0005102 IPI receptor binding
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007165 NAS signal transduction
GO:0007399 TAS nervous system development
GO:0007548 IEA sex differentiation
GO:0008284 IEA positive regulation of cell proliferation
GO:0016020 IEA membrane
GO:0019898 TAS extrinsic component of membrane
GO:0019955 IPI cytokine binding
GO:0031225 IEA anchored component of membrane
GO:0043524 IEA negative regulation of neuron apoptotic process
GO:0060538 IEA skeletal muscle organ development
GO:0070120 IDA ciliary neurotrophic factor-mediated signaling pathway
GO:0097059 IDA CNTFR-CLCF1 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028661 cntfr ciliary neurotrophic factor receptor protein_coding Danio_rerio
ENSMUSG00000028444 Cntfr ciliary neurotrophic factor receptor protein_coding Mus_musculus

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