C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ciliary neurotrophic factor receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000351266 CNTFR-002 ENSG00000122756 9606 - 9:34551432-34589706 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000351266
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000351266 12.920±0.00 3.005±0.00 0.202±0.00 16.159±0.00 13.586±0.00 1.763±0.87 0.819±0.00 1.213±0.00 0.280±0.00 2.044±0.00 23.816±0.00 1.989±0.00 5.270±1.68 5.132±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XA CIL_0002XA_0001 CGP 9:34521040-34590140

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004897 IDA ciliary neurotrophic factor receptor activity
GO:0005102 IPI receptor binding
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007165 NAS signal transduction
GO:0007399 TAS nervous system development
GO:0016020 IEA membrane
GO:0019898 TAS extrinsic component of membrane
GO:0019955 IPI cytokine binding
GO:0031225 IEA anchored component of membrane
GO:0070120 IDA ciliary neurotrophic factor-mediated signaling pathway
GO:0097059 IDA CNTFR-CLCF1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102962 Cntfr-002 protein_coding Mus_musculus 0 2237
ENSMUST00000102961 Cntfr-001 protein_coding Mus_musculus 0 2237
ENSMUST00000084701 Cntfr-003 protein_coding Mus_musculus 0 385
ENSMUST00000064443 Cntfr-004 protein_coding Mus_musculus 0 385
ENSMUST00000151181 Cntfr-006 processed_transcript Mus_musculus 0 377

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